RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 OSBPL9Q96SU4 736 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 GCOM2Q9BZD3 368 aaPredicted RBP17.77■□□□□ 0.44
SCN3B-202ENST00000392770 UNC45AQ9H3U1 944 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 FAN1Q9Y2M0 1017 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 PFASO15067 1338 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 SYNGAP1Q96PV0 1343 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 MIF4GDA9UHW6 222 aaKnown RBP17.77■□□□□ 0.44
SCN3B-202ENST00000392770 CPP00450 1065 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 ICAM1P05362 532 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 PRKCBP05771 671 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 ZC2HC1CQ53FD0 456 aaPredicted RBP17.77■□□□□ 0.44
SCN3B-202ENST00000392770 KSR1Q8IVT5 923 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 FBXL13Q8NEE6 735 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 SCYL1Q96KG9 808 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 KCNH7Q9NS40 1196 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 SUCLA2Q9P2R7 463 aaPredicted RBP17.77■□□□□ 0.44
SCN3B-202ENST00000392770 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.77■□□□□ 0.44
SCN3B-202ENST00000392770 CIITAP33076 1130 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 CUL1Q13616 776 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 NTRK3Q16288 839 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 GMCL1P1Q8NEA9 526 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 PPP4R1Q8TF05 950 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 AGXT2Q9BYV1 514 aa17.77■□□□□ 0.44
SCN3B-202ENST00000392770 RPA1P27694 616 aa17.77■□□□□ 0.43
SCN3B-202ENST00000392770 GLYCTKQ8IVS8 523 aa17.77■□□□□ 0.43
SCN3B-202ENST00000392770 RIC1Q4ADV7 1423 aa17.77■□□□□ 0.43
SCN3B-202ENST00000392770 M0QYV0 167 aa17.77■□□□□ 0.43
SCN3B-202ENST00000392770 MSH4O15457 936 aa17.77■□□□□ 0.43
SCN3B-202ENST00000392770 SSTR3P32745 418 aaPredicted RBP17.77■□□□□ 0.43
SCN3B-202ENST00000392770 EFNA5P52803 228 aa17.77■□□□□ 0.43
SCN3B-202ENST00000392770 TMED2Q15363 201 aa17.77■□□□□ 0.43
SCN3B-202ENST00000392770 SRGAP2BP0DMP2 458 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 CASP8Q14790 479 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 SLMAPQ14BN4 828 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 RIT2Q99578 217 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 LTN1O94822 1766 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 SLIT3O75094 1523 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 CCDC188H7C350 402 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 TJP3O95049 919 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 EMC2Q15006 297 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 PKN1Q16512 942 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 ANKRD20A3Q5VUR7 823 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 RNF10Q8N5U6 811 aaKnown RBP17.76■□□□□ 0.43
SCN3B-202ENST00000392770 ARHGEF2Q92974 986 aaKnown RBP17.76■□□□□ 0.43
SCN3B-202ENST00000392770 FMO2Q99518 471 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 KLHL14Q9P2G3 628 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 PACSIN2Q9UNF0 486 aaPredicted RBP17.76■□□□□ 0.43
SCN3B-202ENST00000392770 INPP5FQ9Y2H2 1132 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 PRKCEQ02156 737 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 GRB10Q13322 594 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 FAM217BQ9NTX9 383 aaPredicted RBP17.76■□□□□ 0.43
SCN3B-202ENST00000392770 NFAT5O94916 1531 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 TGFB2P61812 414 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 ADCY1Q08828 1119 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 GLE1Q53GS7 698 aaKnown RBP17.76■□□□□ 0.43
SCN3B-202ENST00000392770 MFSD14CQ5VZR4 134 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 ENOSF1Q7L5Y1 443 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 BCAS4Q8TDM0 211 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 AGPAT1Q99943 283 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 IL17RBQ9NRM6 502 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 FBXO28Q9NVF7 368 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 SLC12A6Q9UHW9 1150 aa17.76■□□□□ 0.43
SCN3B-202ENST00000392770 ATP1A1P05023 1023 aaKnown RBP17.75■□□□□ 0.43
SCN3B-202ENST00000392770 AP3M2P53677 418 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 HUS1O60921 280 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 ST3GAL1Q11201 340 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 KIAA1841Q6NSI8 718 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 HEMGNQ9BXL5 484 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 STRIP2Q9ULQ0 834 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 MAGED2Q9UNF1 606 aaPredicted RBP17.75■□□□□ 0.43
SCN3B-202ENST00000392770 PEAK1Q9H792 1746 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 MYBL1P10243 752 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 CHST13Q8NET6 341 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 CFAP36Q96G28 342 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 EDEM3Q9BZQ6 932 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 SLCO1A2P46721 670 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 FBXL16Q8N461 479 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 CFAP57Q96MR6 1250 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 POLR3CQ9BUI4 534 aaPredicted RBP17.75■□□□□ 0.43
SCN3B-202ENST00000392770 GINM1Q9NU53 330 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 LCMT1Q9UIC8 334 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 KLK7P49862 253 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 CHP1Q99653 195 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 NGRNQ9NPE2 291 aaKnown RBP17.75■□□□□ 0.43
SCN3B-202ENST00000392770 AGPAT5Q9NUQ2 364 aa17.75■□□□□ 0.43
SCN3B-202ENST00000392770 EIF3DO15371 548 aaKnown RBP eCLIP17.74■□□□□ 0.43
SCN3B-202ENST00000392770 CYP26A1O43174 497 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 ZNF211Q13398 564 aaPredicted RBP17.74■□□□□ 0.43
SCN3B-202ENST00000392770 NNTQ13423 1086 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 ALS2CLQ60I27 953 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 GSDMBQ8TAX9 411 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 RBM41Q96IZ5 413 aaKnown RBP17.74■□□□□ 0.43
SCN3B-202ENST00000392770 INTS9Q9NV88 658 aaKnown RBP17.74■□□□□ 0.43
SCN3B-202ENST00000392770 MRFAP1Q9Y605 127 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 MED1Q15648 1581 aaPredicted RBP17.74■□□□□ 0.43
SCN3B-202ENST00000392770 GMNNO75496 209 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 DDR1Q08345 913 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 IPO11Q9UI26 975 aaKnown RBP17.74■□□□□ 0.43
SCN3B-202ENST00000392770 MSH2P43246 934 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 FMO5P49326 533 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms