RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 FAM105AQ9NUU6 356 aa18.55■□□□□ 0.56
PTPRK-208ENST00000392449 SPG21Q9NZD8 308 aa18.55■□□□□ 0.56
PTPRK-208ENST00000392449 LZTS1Q9Y250 596 aa18.55■□□□□ 0.56
PTPRK-208ENST00000392449 INPP5FQ9Y2H2 1132 aa18.55■□□□□ 0.56
PTPRK-208ENST00000392449 A0A087WWV3 80 aa18.54■□□□□ 0.56
PTPRK-208ENST00000392449 BCAR1P56945 870 aa18.54■□□□□ 0.56
PTPRK-208ENST00000392449 CDC42EP1Q00587 391 aa18.54■□□□□ 0.56
PTPRK-208ENST00000392449 EMC2Q15006 297 aa18.54■□□□□ 0.56
PTPRK-208ENST00000392449 RNF135Q8IUD6 432 aa18.54■□□□□ 0.56
PTPRK-208ENST00000392449 TPH2Q8IWU9 490 aa18.54■□□□□ 0.56
PTPRK-208ENST00000392449 C4orf19Q8IY42 314 aa18.54■□□□□ 0.56
PTPRK-208ENST00000392449 PUF60Q9UHX1 559 aaKnown RBP18.54■□□□□ 0.56
PTPRK-208ENST00000392449 CDH22Q9UJ99 828 aa18.54■□□□□ 0.56
PTPRK-208ENST00000392449 B4GALT3O60512 393 aa18.53■□□□□ 0.56
PTPRK-208ENST00000392449 ZC3H11AO75152 810 aaKnown RBP eCLIP18.53■□□□□ 0.56
PTPRK-208ENST00000392449 PPM1AP35813 382 aa18.53■□□□□ 0.56
PTPRK-208ENST00000392449 GUCY1B3Q02153 619 aa18.53■□□□□ 0.56
PTPRK-208ENST00000392449 LAMTOR4Q0VGL1 99 aa18.53■□□□□ 0.56
PTPRK-208ENST00000392449 KCNC3Q14003 757 aa18.53■□□□□ 0.56
PTPRK-208ENST00000392449 XKR9Q5GH70 373 aa18.53■□□□□ 0.56
PTPRK-208ENST00000392449 TMC7Q7Z402 723 aa18.53■□□□□ 0.56
PTPRK-208ENST00000392449 DIS3L2Q8IYB7 885 aaKnown RBP18.53■□□□□ 0.56
PTPRK-208ENST00000392449 BCL7CQ8WUZ0 217 aaPredicted RBP18.53■□□□□ 0.56
PTPRK-208ENST00000392449 PSPC1Q8WXF1 523 aaKnown RBP18.53■□□□□ 0.56
PTPRK-208ENST00000392449 POP1Q99575 1024 aaKnown RBP18.53■□□□□ 0.56
PTPRK-208ENST00000392449 NAP1L4Q99733 375 aaKnown RBP18.53■□□□□ 0.56
PTPRK-208ENST00000392449 JPH2Q9BR39 696 aaPredicted RBP18.53■□□□□ 0.56
PTPRK-208ENST00000392449 BRMS1Q9HCU9 246 aa18.53■□□□□ 0.56
PTPRK-208ENST00000392449 AGPAT5Q9NUQ2 364 aa18.53■□□□□ 0.56
PTPRK-208ENST00000392449 HCN4Q9Y3Q4 1203 aa18.53■□□□□ 0.56
PTPRK-208ENST00000392449 PRR33A8MZF0 331 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 SLITRK3O94933 977 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 CA8P35219 290 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 PLA2G5P39877 138 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 TECP42680 631 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 AFF1P51825 1210 aaKnown RBP18.52■□□□□ 0.56
PTPRK-208ENST00000392449 KRT17Q04695 432 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 CALCRLQ16602 461 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 PDE12Q6L8Q7 609 aaKnown RBP18.52■□□□□ 0.56
PTPRK-208ENST00000392449 SLFN12Q8IYM2 578 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 AUTS2Q8WXX7 1259 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 EIF2AK1Q9BQI3 630 aaKnown RBP18.52■□□□□ 0.56
PTPRK-208ENST00000392449 TRAIPQ9BWF2 469 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 INO80BQ9C086 356 aaPredicted RBP18.52■□□□□ 0.56
PTPRK-208ENST00000392449 GBP3Q9H0R5 595 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 ZSWIM4Q9H7M6 989 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 XPNPEP1Q9NQW7 623 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 TBC1D13Q9NVG8 400 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 DNAJB4Q9UDY4 337 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 WDFY4Q6ZS81 3184 aa18.52■□□□□ 0.56
PTPRK-208ENST00000392449 DKC1O60832 514 aaKnown RBP eCLIP18.52■□□□□ 0.551e-6■■□□□ 12.2
PTPRK-208ENST00000392449 OFD1O75665 1012 aa18.52■□□□□ 0.55
PTPRK-208ENST00000392449 BAG4O95429 457 aaKnown RBP18.52■□□□□ 0.55
PTPRK-208ENST00000392449 RFC5P40937 340 aa18.52■□□□□ 0.55
PTPRK-208ENST00000392449 RNF149Q8NC42 400 aa18.52■□□□□ 0.55
PTPRK-208ENST00000392449 FAM122AQ96E09 287 aa18.52■□□□□ 0.55
PTPRK-208ENST00000392449 CDCA3Q99618 268 aaPredicted RBP18.52■□□□□ 0.55
PTPRK-208ENST00000392449 MRPL9Q9BYD2 267 aaKnown RBP18.52■□□□□ 0.55
PTPRK-208ENST00000392449 NRDE2Q9H7Z3 1164 aa18.52■□□□□ 0.55
PTPRK-208ENST00000392449 PCDHB2Q9Y5E7 798 aa18.52■□□□□ 0.55
PTPRK-208ENST00000392449 C2orf71A6NGG8 1288 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 NEMFO60524 1076 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 ATP2B1P20020 1258 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 SP100P23497 879 aaPredicted RBP18.51■□□□□ 0.55
PTPRK-208ENST00000392449 HOXA11P31270 313 aaPredicted RBP18.51■□□□□ 0.55
PTPRK-208ENST00000392449 TXKP42681 527 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 ALDH7A1P49419 539 aaKnown RBP18.51■□□□□ 0.55
PTPRK-208ENST00000392449 NOMO2Q5JPE7 1267 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 UBXN11Q5T124 520 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 ANKRD54Q6NXT1 300 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 SYCE2Q6PIF2 218 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 GLB1LQ6UWU2 654 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 AGMOQ6ZNB7 445 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 FERMT3Q86UX7 667 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 ZNF280BQ86YH2 543 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 RPGRIP1Q96KN7 1286 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 S1PR5Q9H228 398 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 TMEM60Q9H2L4 133 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 TTC12Q9H892 705 aaPredicted RBP18.51■□□□□ 0.55
PTPRK-208ENST00000392449 NGRNQ9NPE2 291 aaKnown RBP18.51■□□□□ 0.55
PTPRK-208ENST00000392449 PCDHA12Q9UN75 941 aa18.51■□□□□ 0.55
PTPRK-208ENST00000392449 POTEMA6NI47 508 aa18.5■□□□□ 0.55
PTPRK-208ENST00000392449 LOC730098B7Z3J9 87 aa18.5■□□□□ 0.55
PTPRK-208ENST00000392449 SMC1AQ14683 1233 aaKnown RBP18.5■□□□□ 0.55
PTPRK-208ENST00000392449 ERICH6BQ5W0A0 696 aa18.5■□□□□ 0.55
PTPRK-208ENST00000392449 OTUD6AQ7L8S5 288 aa18.5■□□□□ 0.55
PTPRK-208ENST00000392449 CCDC83Q8IWF9 413 aa18.5■□□□□ 0.55
PTPRK-208ENST00000392449 MRPL43Q8N983 215 aaKnown RBP18.5■□□□□ 0.55
PTPRK-208ENST00000392449 SUSD6Q92537 303 aa18.5■□□□□ 0.55
PTPRK-208ENST00000392449 TMEM169Q96HH4 297 aa18.5■□□□□ 0.55
PTPRK-208ENST00000392449 MTRQ99707 1265 aa18.5■□□□□ 0.55
PTPRK-208ENST00000392449 HSD17B14Q9BPX1 270 aa18.5■□□□□ 0.55
PTPRK-208ENST00000392449 ZNF623O75123 536 aa18.49■□□□□ 0.55
PTPRK-208ENST00000392449 SLC11A1P49279 550 aa18.49■□□□□ 0.55
PTPRK-208ENST00000392449 RAB27AP51159 221 aa18.49■□□□□ 0.55
PTPRK-208ENST00000392449 RNASELQ05823 741 aaKnown RBP18.49■□□□□ 0.55
PTPRK-208ENST00000392449 TRIM29Q14134 588 aa18.49■□□□□ 0.55
PTPRK-208ENST00000392449 HERC4Q5GLZ8 1057 aaPredicted RBP18.49■□□□□ 0.55
PTPRK-208ENST00000392449 TMEM184AQ6ZMB5 413 aa18.49■□□□□ 0.55
PTPRK-208ENST00000392449 SRGAP1Q7Z6B7 1085 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms