RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 DHX33Q9H6R0 707 aaKnown RBP27.46■■□□□ 1.99
SHOX2-201ENST00000389589 DDX41Q9UJV9 622 aaKnown RBP27.46■■□□□ 1.99
SHOX2-201ENST00000389589 TFR2Q9UP52 801 aa27.46■■□□□ 1.99
SHOX2-201ENST00000389589 PLXNA1Q9UIW2 1896 aa27.46■■□□□ 1.99
SHOX2-201ENST00000389589 EFCAB8A8MWE9 144 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 ANXA13P27216 316 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 CNGA1P29973 690 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 RFC5P40937 340 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 STAT5BP51692 787 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 CETN1Q12798 172 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 NAA30Q147X3 362 aaPredicted RBP27.45■■□□□ 1.99
SHOX2-201ENST00000389589 CBWD6Q4V339 395 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 CBWD3Q5JTY5 395 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 CBWD5Q5RIA9 395 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 EEPD1Q7L9B9 569 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 FMNL3Q8IVF7 1028 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 GPRC5AQ8NFJ5 357 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 KCNN1Q92952 543 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 SECISBP2LQ93073 1101 aaKnown RBP27.45■■□□□ 1.99
SHOX2-201ENST00000389589 MAP7D2Q96T17 732 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 PPME1Q9Y570 386 aa27.45■■□□□ 1.99
SHOX2-201ENST00000389589 GFPT1Q06210 699 aaPredicted RBP27.45■■□□□ 1.98
SHOX2-201ENST00000389589 SLC18A3Q16572 532 aa27.45■■□□□ 1.98
SHOX2-201ENST00000389589 IRF2BP2Q7Z5L9 587 aa27.45■■□□□ 1.98
SHOX2-201ENST00000389589 PCYT2Q99447 389 aa27.45■■□□□ 1.98
SHOX2-201ENST00000389589 ARHGAP28Q9P2N2 729 aa27.45■■□□□ 1.98
SHOX2-201ENST00000389589 PLXNB2O15031 1838 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 CYP2C8P10632 490 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 RFX1P22670 979 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 PRKCIP41743 596 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 LY6KQ17RY6 165 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 BRDTQ58F21 947 aaPredicted RBP27.44■■□□□ 1.98
SHOX2-201ENST00000389589 SLC7A3Q8WY07 619 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 FAM167AQ96KS9 214 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 INTS2Q9H0H0 1204 aaKnown RBP27.44■■□□□ 1.98
SHOX2-201ENST00000389589 SIP14410 1827 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 ASB14A6NK59 587 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 ANKRD63C9JTQ0 380 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 TADA3O75528 432 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 TCF7P36402 384 aaPredicted RBP27.44■■□□□ 1.98
SHOX2-201ENST00000389589 ARID5AQ03989 594 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 IQCEQ6IPM2 695 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 GPIHBP1Q8IV16 184 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 MS4A4AQ96JQ5 239 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 PORCNQ9H237 461 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 AZI2Q9H6S1 392 aa27.44■■□□□ 1.98
SHOX2-201ENST00000389589 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.44■■□□□ 1.98
SHOX2-201ENST00000389589 V9GYY5 206 aaPredicted RBP27.44■■□□□ 1.98
SHOX2-201ENST00000389589 PDHXO00330 501 aa27.43■■□□□ 1.98
SHOX2-201ENST00000389589 PMM2O15305 246 aa27.43■■□□□ 1.98
SHOX2-201ENST00000389589 ADSSP30520 456 aa27.43■■□□□ 1.98
SHOX2-201ENST00000389589 LRRN4CLQ8ND94 238 aa27.43■■□□□ 1.98
SHOX2-201ENST00000389589 UBXN4Q92575 508 aa27.43■■□□□ 1.98
SHOX2-201ENST00000389589 STK33Q9BYT3 514 aa27.43■■□□□ 1.98
SHOX2-201ENST00000389589 STAT1P42224 750 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 CELF3Q5SZQ8 465 aaKnown RBP27.42■■□□□ 1.98
SHOX2-201ENST00000389589 CEP112Q8N8E3 955 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 CEP89Q96ST8 783 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 EMSYQ7Z589 1322 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 ADGRA3Q8IWK6 1321 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 CCL15-CCL14A0A0B4J2E2 113 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 FERP16591 822 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 GARTP22102 1010 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 TARBP2Q15633 366 aaKnown RBP27.42■■□□□ 1.98
SHOX2-201ENST00000389589 ELF2Q15723 593 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 CCL15Q16663 113 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 C10orf76Q5T2E6 689 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 TRIM58Q8NG06 486 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 GBA2Q9HCG7 927 aaPredicted RBP27.42■■□□□ 1.98
SHOX2-201ENST00000389589 APEX2Q9UBZ4 518 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 DUSP10Q9Y6W6 482 aa27.42■■□□□ 1.98
SHOX2-201ENST00000389589 MYH10P35580 1976 aa27.41■■□□□ 1.98
SHOX2-201ENST00000389589 ANO9A1A5B4 782 aa27.41■■□□□ 1.98
SHOX2-201ENST00000389589 ARIH2O95376 493 aa27.41■■□□□ 1.98
SHOX2-201ENST00000389589 NAMPTP43490 491 aa27.41■■□□□ 1.98
SHOX2-201ENST00000389589 GCLCP48506 637 aaPredicted RBP27.41■■□□□ 1.98
SHOX2-201ENST00000389589 SNRNP35Q16560 246 aaKnown RBP27.41■■□□□ 1.98
SHOX2-201ENST00000389589 ANKRD23Q86SG2 305 aa27.41■■□□□ 1.98
SHOX2-201ENST00000389589 VTI1AQ96AJ9 217 aa27.41■■□□□ 1.98
SHOX2-201ENST00000389589 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.41■■□□□ 1.98
SHOX2-201ENST00000389589 MACROD2A1Z1Q3 448 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 TACC1O75410 805 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 ARL2P36404 184 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 DLG4P78352 724 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 ENPEPQ07075 957 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 WHAMMP3Q1A5X7 153 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 ERCC6LQ2NKX8 1250 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 FBXL18Q96ME1 805 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 GPR20Q99678 358 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 EFCC1Q9HA90 598 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 DNAJC12Q9UKB3 198 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 BTBD19C9JJ37 291 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 NOP56O00567 594 aaKnown RBP27.4■■□□□ 1.98
SHOX2-201ENST00000389589 HNRNPDLO14979 420 aaKnown RBP27.4■■□□□ 1.98
SHOX2-201ENST00000389589 LGR5O75473 907 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 AMPD2Q01433 879 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 PTK2Q05397 1052 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 USP37Q86T82 979 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 VPS36Q86VN1 386 aa27.4■■□□□ 1.98
SHOX2-201ENST00000389589 RNF10Q8N5U6 811 aaKnown RBP27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms