RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 TRIM66O15016 1216 aa17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 RASA4O43374 803 aa17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 PSMC5P62195 406 aa17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 BYSLQ13895 437 aaKnown RBP17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 KIAA1755Q5JYT7 1200 aa17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 VGLL2Q8N8G2 317 aa17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 C11orf70Q9BRQ4 267 aa17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 BCAP29Q9UHQ4 241 aa17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 RICTORQ6R327 1708 aa17.27■□□□□ 0.35
PTPRN2-201ENST00000389413 TXNDC9O14530 226 aa17.27■□□□□ 0.35
PTPRN2-201ENST00000389413 RTN2O75298 545 aa17.27■□□□□ 0.35
PTPRN2-201ENST00000389413 PLS3P13797 630 aa17.27■□□□□ 0.35
PTPRN2-201ENST00000389413 SPARCL1Q14515 664 aa17.27■□□□□ 0.35
PTPRN2-201ENST00000389413 KLHDC7AQ5VTJ3 777 aa17.27■□□□□ 0.35
PTPRN2-201ENST00000389413 CDC42EP5Q6NZY7 148 aa17.27■□□□□ 0.35
PTPRN2-201ENST00000389413 ENOSF1Q7L5Y1 443 aa17.27■□□□□ 0.35
PTPRN2-201ENST00000389413 ANKZF1Q9H8Y5 726 aa17.27■□□□□ 0.35
PTPRN2-201ENST00000389413 TTLL3Q9Y4R7 772 aa17.27■□□□□ 0.35
PTPRN2-201ENST00000389413 A0A087X0B3 334 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 MAPK13O15264 365 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 NR1H3Q13133 447 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 HHIPL2Q6UWX4 724 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 PRPF38AQ8NAV1 312 aaKnown RBP17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 PROCA1Q8NCQ7 364 aaPredicted RBP17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 TMEM35BQ8NCS4 154 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 SAAL1Q96ER3 474 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 CCDC97Q96F63 343 aaPredicted RBP17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 CCT8L2Q96SF2 557 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 BAG2O95816 211 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 SLC12A2P55011 1212 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 HDLBPQ00341 1268 aaKnown RBP17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 SLC27A3Q5K4L6 730 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 MAP3K21Q5TCX8 1036 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 TMEM270Q6UE05 265 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 SRRM1Q8IYB3 904 aaKnown RBP17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 FBXL13Q8NEE6 735 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 SEMA6BQ9H3T3 888 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 CAPN6Q9Y6Q1 641 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 CAPN9O14815 690 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 TUBB6Q9BUF5 446 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 GCKP35557 465 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 IRX4P78413 519 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 PAXIP1Q6ZW49 1069 aaPredicted RBP17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 LDHDQ86WU2 507 aa17.26■□□□□ 0.35
PTPRN2-201ENST00000389413 LRRIQ3A6PVS8 624 aaPredicted RBP17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 C21orf2O43822 256 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 PDE1BQ01064 536 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 KCTD2Q14681 263 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 CPSF2Q9P2I0 782 aaKnown RBP17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 CPP00450 1065 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 BRAFP15056 766 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 PASD1Q8IV76 773 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 KCTD17Q8N5Z5 321 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 ISCUQ9H1K1 167 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 KCND2Q9NZV8 630 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 NME8Q8N427 588 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 ZNF473Q8WTR7 871 aaKnown RBP17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 MKNK1Q9BUB5 465 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 MYBL1P10243 752 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 PSMA2P25787 234 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 SCARA5Q6ZMJ2 495 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 SH3RF1Q7Z6J0 888 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 TTLL6Q8N841 843 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 TRIM51Q9BSJ1 452 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 EHD2Q9NZN4 543 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 SEPT10Q9P0V9 454 aa17.25■□□□□ 0.35
PTPRN2-201ENST00000389413 ARHGAP23Q9P227 1491 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 A0A087X0T9 212 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 WDR91A4D1P6 747 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 CYP26A1O43174 497 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 FAM228BP0C875 321 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 LSP1P33241 339 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 PMS1P54277 932 aaKnown RBP17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 OSTNP61366 133 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 EPM2AIP1Q7L775 607 aaPredicted RBP17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 SNF8Q96H20 258 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 TTC25Q96NG3 672 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 RAB21Q9UL25 225 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 DCCP43146 1447 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 SIGLEC1Q9BZZ2 1709 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 TLR3O15455 904 aaKnown RBP17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 GARSP41250 739 aaKnown RBP17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 CATSPER3Q86XQ3 398 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 C1orf54Q8WWF1 131 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 RNF25Q96BH1 459 aaPredicted RBP17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 GBP5Q96PP8 586 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 NBPF3Q9H094 633 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 MST1RQ04912 1400 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 EIF3DO15371 548 aaKnown RBP eCLIP17.24■□□□□ 0.359e-7■■■□□ 16.3
PTPRN2-201ENST00000389413 CLDN3O15551 220 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 PRPSAP2O60256 369 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 CRCPO75575 148 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 CALB1P05937 261 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 TMEM253P0C7T8 217 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 CYP11B2P19099 503 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 BAG6P46379 1132 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 CIAPIN1Q6FI81 312 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 LCMT1Q9UIC8 334 aa17.24■□□□□ 0.35
PTPRN2-201ENST00000389413 H3BQF6 201 aa17.23■□□□□ 0.35
PTPRN2-201ENST00000389413 SRGAP2CP0DJJ0 459 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms