RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 TPPPO94811 219 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 ATE1O95260 518 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 CAPNS1P04632 268 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 FGFR4P22455 802 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 PEX2P28328 305 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 ACTN2P35609 894 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 CDC16Q13042 620 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 SV2CQ496J9 727 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 VWA3BQ502W6 1294 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 GALNTL5Q7Z4T8 443 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 IQCF2Q8IXL9 164 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 C7orf31Q8N865 590 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 BTN2A2Q8WVV5 523 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 AARSD1Q9BTE6 412 aaKnown RBP6.4□□□□□ -1.38
ERCC4-202ENST00000389138 TMEM120AQ9BXJ8 343 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 KIAA1683Q9H0B3 1180 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 FAM204AQ9H8W3 233 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 PXDNLA1KZ92 1463 aa6.4□□□□□ -1.38
ERCC4-202ENST00000389138 TCRBV16S1A1N1A0A5B0 115 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 H7C0S8 307 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 SLC7A4O43246 635 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 TBX1O43435 398 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 USO1O60763 962 aaKnown RBP6.4□□□□□ -1.39
ERCC4-202ENST00000389138 MAFO75444 373 aaPredicted RBP6.4□□□□□ -1.39
ERCC4-202ENST00000389138 OFD1O75665 1012 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 PABPC1P11940 636 aaKnown RBP6.4□□□□□ -1.39
ERCC4-202ENST00000389138 MX2P20592 715 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 MTHFSP49914 203 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 SLC12A2P55011 1212 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 DRG2P55039 364 aaKnown RBP6.4□□□□□ -1.39
ERCC4-202ENST00000389138 IL2P60568 153 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 MECOMQ03112 1051 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 SCARB2Q14108 478 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 SETMARQ53H47 684 aaPredicted RBP6.4□□□□□ -1.39
ERCC4-202ENST00000389138 LILRA6Q6PI73 481 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 EPHX4Q8IUS5 362 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 COLGALT2Q8IYK4 626 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 C16orf71Q8IYS4 520 aaPredicted RBP6.4□□□□□ -1.39
ERCC4-202ENST00000389138 GPR161Q8N6U8 529 aaKnown RBP6.4□□□□□ -1.39
ERCC4-202ENST00000389138 WNK4Q96J92 1243 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 TEKT5Q96M29 485 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 IPO9Q96P70 1041 aaKnown RBP6.4□□□□□ -1.39
ERCC4-202ENST00000389138 TCF12Q99081 682 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 ARGLU1Q9NWB6 273 aaPredicted RBP6.4□□□□□ -1.39
ERCC4-202ENST00000389138 HOXC10Q9NYD6 342 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 FBXL5Q9UKA1 691 aa6.4□□□□□ -1.39
ERCC4-202ENST00000389138 C4BP0C0L5 1744 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 NPC1L1Q9UHC9 1359 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 VIRMAQ69YN4 1812 aaKnown RBP6.39□□□□□ -1.39
ERCC4-202ENST00000389138 CGNL1Q0VF96 1302 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 KCPQ6ZWJ8 1503 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 SKAP2O75563 359 aaPredicted RBP6.39□□□□□ -1.39
ERCC4-202ENST00000389138 ADRB2P07550 413 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 DESP17661 470 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 KCNQ4P56696 695 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 INHBEP58166 350 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 SUMO1P63165 101 aaKnown RBP6.39□□□□□ -1.39
ERCC4-202ENST00000389138 ICA1Q05084 483 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 TNP2Q05952 138 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 AP1B1Q10567 949 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 LRRC32Q14392 662 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 MBTPS1Q14703 1052 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 SMAD1Q15797 465 aaKnown RBP6.39□□□□□ -1.39
ERCC4-202ENST00000389138 TAF12Q16514 161 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 FAM209BQ5JX69 171 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 TRIM68Q6AZZ1 485 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 KLHL10Q6JEL2 608 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 KDELC2Q7Z4H8 507 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 RRP36Q96EU6 259 aaKnown RBP6.39□□□□□ -1.39
ERCC4-202ENST00000389138 SORBS1Q9BX66 1292 aaKnown RBP6.39□□□□□ -1.39
ERCC4-202ENST00000389138 WASH6PQ9NQA3 447 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 MBIPQ9NS73 344 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 ZSWIM5Q9P217 1185 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 PCDHGB2Q9Y5G2 931 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 A0A1W2PP64 1363 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 PLEKHG2Q9H7P9 1386 aa6.39□□□□□ -1.39
ERCC4-202ENST00000389138 BLACEA4D250 179 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 PGPEP1LA6NFU8 196 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 MEIS3P2A8K0S8 358 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 BNIP3LO60238 219 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 CCDC159P0C7I6 412 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 FBLN1P23142 703 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 GRNP28799 593 aaKnown RBP6.38□□□□□ -1.39
ERCC4-202ENST00000389138 CASP5P51878 434 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 PDE4BQ07343 736 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 KIAA2012Q0VF49 1180 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 BLMHQ13867 455 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 LCE2AQ5TA79 106 aaPredicted RBP6.38□□□□□ -1.39
ERCC4-202ENST00000389138 DSTYKQ6XUX3 929 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 BTLAQ7Z6A9 289 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 CACNA2D3Q8IZS8 1091 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 HPS3Q969F9 1004 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 ARL8AQ96BM9 186 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 HSH2DQ96JZ2 352 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 ZSCAN31Q96LW9 406 aaPredicted RBP6.38□□□□□ -1.39
ERCC4-202ENST00000389138 NCAPGQ9BPX3 1015 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 SLF1Q9BQI6 1058 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 COL25A1Q9BXS0 654 aaPredicted RBP6.38□□□□□ -1.39
ERCC4-202ENST00000389138 FANCFQ9NPI8 374 aa6.38□□□□□ -1.39
ERCC4-202ENST00000389138 OLA1Q9NTK5 396 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms