RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 USP11P51784 963 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 LRP10Q7Z4F1 713 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 SYNE4Q8N205 404 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 CRACR2BQ8N4Y2 399 aaPredicted RBP16.11■□□□□ 0.17
VLDLR-202ENST00000382099 ACTRT1Q8TDG2 376 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 CKAP2Q8WWK9 683 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 APPBP2Q92624 585 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 INPP5DQ92835 1189 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 PRKAG3Q9UGI9 489 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 FAF1Q9UNN5 650 aaPredicted RBP16.11■□□□□ 0.17
VLDLR-202ENST00000382099 IQSEC3Q9UPP2 1182 aaPredicted RBP16.11■□□□□ 0.17
VLDLR-202ENST00000382099 PSMG1O95456 288 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 TROVE2P10155 538 aaKnown RBP eCLIP16.11■□□□□ 0.17
VLDLR-202ENST00000382099 FCER1AP12319 257 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 THOC5Q13769 683 aaKnown RBP16.11■□□□□ 0.17
VLDLR-202ENST00000382099 TAF1BQ53T94 588 aaPredicted RBP16.11■□□□□ 0.17
VLDLR-202ENST00000382099 EAPPQ56P03 285 aaPredicted RBP16.11■□□□□ 0.17
VLDLR-202ENST00000382099 ZNF790Q6PG37 636 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 TTC5Q8N0Z6 440 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.11■□□□□ 0.17
VLDLR-202ENST00000382099 SLC7A6OSQ96CW6 309 aaPredicted RBP16.11■□□□□ 0.17
VLDLR-202ENST00000382099 TRAIPQ9BWF2 469 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 EPB41L4BQ9H329 900 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 NR2E1Q9Y466 385 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 ADAMTS7Q9UKP4 1686 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 UBA7P41226 1012 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 AP1B1Q10567 949 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 GIT2Q14161 759 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 WTAPQ15007 396 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 SRRM1Q8IYB3 904 aaKnown RBP16.11■□□□□ 0.17
VLDLR-202ENST00000382099 HEY1Q9Y5J3 304 aa16.11■□□□□ 0.17
VLDLR-202ENST00000382099 A0A1W2PRG0 241 aa16.1■□□□□ 0.17
VLDLR-202ENST00000382099 DYTNA2CJ06 578 aa16.1■□□□□ 0.17
VLDLR-202ENST00000382099 GSTA3Q16772 222 aa16.1■□□□□ 0.17
VLDLR-202ENST00000382099 CGB2Q6NT52 195 aa16.1■□□□□ 0.17
VLDLR-202ENST00000382099 ZFP69BQ9UJL9 534 aa16.1■□□□□ 0.17
VLDLR-202ENST00000382099 SSU72P8A0A1W2PR75 194 aa16.1■□□□□ 0.17
VLDLR-202ENST00000382099 ADCY3O60266 1144 aa16.1■□□□□ 0.17
VLDLR-202ENST00000382099 IDH1O75874 414 aaKnown RBP16.1■□□□□ 0.17
VLDLR-202ENST00000382099 PSMD7P51665 324 aa16.1■□□□□ 0.17
VLDLR-202ENST00000382099 STK4Q13043 487 aa16.1■□□□□ 0.17
VLDLR-202ENST00000382099 SYDE2Q5VT97 1194 aa16.1■□□□□ 0.17
VLDLR-202ENST00000382099 FNBP1Q96RU3 617 aa16.1■□□□□ 0.17
VLDLR-202ENST00000382099 PYM1Q9BRP8 204 aaKnown RBP16.1■□□□□ 0.17
VLDLR-202ENST00000382099 PUS3Q9BZE2 481 aaKnown RBP16.1■□□□□ 0.17
VLDLR-202ENST00000382099 SIK3Q9Y2K2 1263 aa16.1■□□□□ 0.17
VLDLR-202ENST00000382099 GYG2O15488 501 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 DKC1O60832 514 aaKnown RBP eCLIP16.09■□□□□ 0.17
VLDLR-202ENST00000382099 PTPN4P29074 926 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 ZAP70P43403 619 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 MTFR1Q15390 333 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 TMEM259Q4ZIN3 620 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 CROCCP2Q86T23 111 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 ERP44Q9BS26 406 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 TCP11L1Q9NUJ3 509 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 V9GY48 417 aaPredicted RBP16.09■□□□□ 0.17
VLDLR-202ENST00000382099 RGPD5Q99666 1765 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 AFDNP55196 1824 aaKnown RBP16.09■□□□□ 0.17
VLDLR-202ENST00000382099 DCTN3O75935 186 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 SERPING1P05155 500 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 ZNF211Q13398 564 aaPredicted RBP16.09■□□□□ 0.17
VLDLR-202ENST00000382099 ITGA7Q13683 1181 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 EXOC3L4Q17RC7 722 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 SRPK1Q96SB4 655 aaKnown RBP16.09■□□□□ 0.17
VLDLR-202ENST00000382099 MPHOSPH6Q99547 160 aaKnown RBP16.09■□□□□ 0.17
VLDLR-202ENST00000382099 KANSL2Q9H9L4 492 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 ARMCX3Q9UH62 379 aaPredicted RBP16.09■□□□□ 0.17
VLDLR-202ENST00000382099 DOLKQ9UPQ8 538 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 FGFR1OPO95684 399 aaKnown RBP16.09■□□□□ 0.17
VLDLR-202ENST00000382099 YY1P25490 414 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 DSG1Q02413 1049 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 PDE1CQ14123 709 aaPredicted RBP16.09■□□□□ 0.17
VLDLR-202ENST00000382099 C16orf87Q6PH81 154 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 SH3TC2Q8TF17 1288 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 BAP1Q92560 729 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 SPOCK2Q92563 424 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 LSM14BQ9BX40 385 aaKnown RBP16.09■□□□□ 0.17
VLDLR-202ENST00000382099 SLCO1B3Q9NPD5 702 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 KRT82Q9NSB4 513 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 EFR3BQ9Y2G0 817 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 CAMTA1Q9Y6Y1 1673 aa16.09■□□□□ 0.17
VLDLR-202ENST00000382099 HTR3EA5X5Y0 456 aa16.08■□□□□ 0.17
VLDLR-202ENST00000382099 PLCG2P16885 1265 aa16.08■□□□□ 0.17
VLDLR-202ENST00000382099 LRRC24Q50LG9 513 aa16.08■□□□□ 0.17
VLDLR-202ENST00000382099 CFAP69A5D8W1 941 aa16.08■□□□□ 0.16
VLDLR-202ENST00000382099 EPS15P42566 896 aa16.08■□□□□ 0.16
VLDLR-202ENST00000382099 VPS41P49754 854 aa16.08■□□□□ 0.16
VLDLR-202ENST00000382099 BTKQ06187 659 aa16.08■□□□□ 0.16
VLDLR-202ENST00000382099 SLC18A3Q16572 532 aa16.08■□□□□ 0.16
VLDLR-202ENST00000382099 ASTE1Q2TB18 679 aaPredicted RBP16.08■□□□□ 0.16
VLDLR-202ENST00000382099 RABL6Q3YEC7 729 aaPredicted RBP16.08■□□□□ 0.16
VLDLR-202ENST00000382099 HGSNATQ68CP4 663 aa16.08■□□□□ 0.16
VLDLR-202ENST00000382099 ARHGEF18Q6ZSZ5 1173 aa16.08■□□□□ 0.16
VLDLR-202ENST00000382099 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
VLDLR-202ENST00000382099 C14orf80Q86SX3 495 aa16.08■□□□□ 0.16
VLDLR-202ENST00000382099 SYNCQ9H7C4 482 aa16.08■□□□□ 0.16
VLDLR-202ENST00000382099 DDX3XO00571 662 aaKnown RBP eCLIP16.07■□□□□ 0.16
VLDLR-202ENST00000382099 RNASEH1O60930 286 aaKnown RBP16.07■□□□□ 0.16
VLDLR-202ENST00000382099 BCRP11274 1271 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms