RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 NFKBIAP25963 317 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 SEC24CP53992 1094 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 POLE2P56282 527 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 CTDSPL2Q05D32 466 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 KLC1Q07866 573 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 SLC39A6Q13433 755 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 RIPK1Q13546 671 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 COG2Q14746 738 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 UBE3CQ15386 1083 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 GNPTABQ3T906 1256 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 LACTB2Q53H82 288 aaPredicted RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 RASIP1Q5U651 963 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 TRPM8Q7Z2W7 1104 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 MCUR1Q96AQ8 359 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 FMO2Q99518 471 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 MIS12Q9H081 205 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 MYLK2Q9H1R3 596 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 SLC4A4Q9Y6R1 1079 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 ZNF185O15231 689 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 RASSF9O75901 435 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 HSPA9P38646 679 aaKnown RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 HALP42357 657 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 RANBP1P43487 201 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 EIF6P56537 245 aaKnown RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 TIMM10P62072 90 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 IRX4P78413 519 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 PTPN12Q05209 780 aaKnown RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 EHHADHQ08426 723 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 KCNB1Q14721 858 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 TSC22D1Q15714 1073 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 DDB1Q16531 1140 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 CDC37Q16543 378 aaPredicted RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 GEN1Q17RS7 908 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 TTMPQ5BVD1 217 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 ARHGEF18Q6ZSZ5 1173 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 ARHGAP27Q6ZUM4 889 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 FANCBQ8NB91 859 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 ZBTB10Q96DT7 871 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 OLFM3Q96PB7 478 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 CHP1Q99653 195 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 ELAC2Q9BQ52 826 aaKnown RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 ZMYND12Q9H0C1 365 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 CERS4Q9HA82 394 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 KRT82Q9NSB4 513 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 SEC63Q9UGP8 760 aaKnown RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 ESYT3A0FGR9 886 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 KLHL33A6NCF5 533 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 AGTP01019 485 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 NQO1P15559 274 aaKnown RBP6.1□□□□□ -1.43
RFC1-202ENST00000381897 CXCR5P32302 372 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 CYP27A1Q02318 531 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 XRCC4Q13426 336 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 LAMB3Q13751 1172 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 SPDYCQ5MJ68 293 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 PET117Q6UWS5 81 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 PIK3AP1Q6ZUJ8 805 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 SGMS1Q86VZ5 419 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 MAB21L3Q8N8X9 362 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 RSPH1Q8WYR4 309 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 LZICQ8WZA0 190 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 HDAC2Q92769 488 aaKnown RBP6.1□□□□□ -1.43
RFC1-202ENST00000381897 SMC6Q96SB8 1091 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 SIKE1Q9BRV8 207 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 ACAT2Q9BWD1 397 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 CARD9Q9H257 536 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 MTRRQ9UBK8 725 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 CEP170BQ9Y4F5 1589 aaPredicted RBP6.1□□□□□ -1.43
RFC1-202ENST00000381897 MYO5BQ9ULV0 1848 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 GOLGA8SH3BPF8 625 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 TRAPPC3O43617 180 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 PFDN1O60925 122 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 DCTN3O75935 186 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 CLUP10909 449 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 CTCFP49711 727 aaPredicted RBP6.1□□□□□ -1.43
RFC1-202ENST00000381897 ELF3P78545 371 aaPredicted RBP6.1□□□□□ -1.43
RFC1-202ENST00000381897 IL9RQ01113 521 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 IFI44LQ53G44 452 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 FIGNQ5HY92 759 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 CCDC62Q6P9F0 684 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 SDCCAG8Q86SQ7 713 aaPredicted RBP6.1□□□□□ -1.43
RFC1-202ENST00000381897 AGGF1Q8N302 714 aaeCLIP6.1□□□□□ -1.431e-7■□□□□ 9.2
RFC1-202ENST00000381897 PJA1Q8NG27 643 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 SCYL1Q96KG9 808 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 AK8Q96MA6 479 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 VPS11Q9H270 941 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 ARMT1Q9H993 441 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 TFCP2L1Q9NZI6 479 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 DNM3Q9UQ16 869 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 TAF6LQ9Y6J9 622 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 SIGLEC1Q9BZZ2 1709 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 OVOS2A0A0J9YW53 1432 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 OVOS2Q6IE36 1432 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 PPP1R3GB7ZBB8 358 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 DNAJB2P25686 324 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 PIK3CAP42336 1068 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 CPA2P48052 419 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 IFNAR2P48551 515 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 PER3P56645 1201 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 HERVK_113P62684 666 aa6.1□□□□□ -1.43
RFC1-202ENST00000381897 PTGDRQ13258 359 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms