RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 ECT2Q9H8V3 914 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 PRPSAP2O60256 369 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 ZBED1O96006 694 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 SEMA3FQ13275 785 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 RBM46Q8TBY0 533 aaKnown RBP14.93□□□□□ -0.02
SNPH-201ENST00000381867 FAM149B1Q96BN6 582 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 LRRC37BQ96QE4 947 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 OSBPL1AQ9BXW6 950 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 KNDC1Q76NI1 1749 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 AP2B1P63010 937 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 OCRLQ01968 901 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 TRIM67Q6ZTA4 783 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 ENAHQ8N8S7 591 aaPredicted RBP14.93□□□□□ -0.02
SNPH-201ENST00000381867 ARMC2Q8NEN0 867 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 COA7Q96BR5 231 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 TTC25Q96NG3 672 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 LY9Q9HBG7 655 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 PARVGQ9HBI0 331 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 ZC4H2Q9NQZ6 224 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 DAGLAQ9Y4D2 1042 aa14.93□□□□□ -0.02
SNPH-201ENST00000381867 MAN1A2O60476 641 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 ZSCAN20P17040 1043 aaPredicted RBP14.92□□□□□ -0.02
SNPH-201ENST00000381867 PTPREP23469 700 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 CHRNA5P30532 468 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 TGFB2P61812 414 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 KRT39Q6A163 491 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 KLC4Q9NSK0 619 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 NOC2LQ9Y3T9 749 aaKnown RBP14.92□□□□□ -0.02
SNPH-201ENST00000381867 CHEK2O96017 543 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 CYP2D6P10635 497 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 TEDDM1Q5T9Z0 273 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 KIAA1841Q6NSI8 718 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 PGBD1Q96JS3 809 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 ARHGAP10A1A4S6 786 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 TJP3O95049 919 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 CCDC144BQ3MJ40 725 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 RGS9BPQ6ZS82 235 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 EEPD1Q7L9B9 569 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 ZCCHC17Q9NP64 241 aaKnown RBP14.92□□□□□ -0.02
SNPH-201ENST00000381867 MRPL40Q9NQ50 206 aaKnown RBP14.92□□□□□ -0.02
SNPH-201ENST00000381867 SLC4A7Q9Y6M7 1214 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 KLC3Q6P597 504 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 ZNF579Q8NAF0 562 aaKnown RBP14.92□□□□□ -0.02
SNPH-201ENST00000381867 CHMP6Q96FZ7 201 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 TBC1D22BQ9NU19 505 aa14.92□□□□□ -0.02
SNPH-201ENST00000381867 ARHGEF37A1IGU5 675 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 RASSF10A6NK89 507 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 DRP2Q13474 957 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 TOB2Q14106 344 aaPredicted RBP14.91□□□□□ -0.02
SNPH-201ENST00000381867 PRPF38AQ8NAV1 312 aaKnown RBP14.91□□□□□ -0.02
SNPH-201ENST00000381867 LPAR1Q92633 364 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 FAM20AQ96MK3 541 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 OSBPL9Q96SU4 736 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 KLHL38Q2WGJ6 581 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 TKFCQ3LXA3 575 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 METTL23Q86XA0 190 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 NDE1Q9NXR1 346 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 USP27XA6NNY8 438 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 MEIS1O00470 390 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 CEP95Q96GE4 821 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 SH3GL3Q99963 347 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 WARS2Q9UGM6 360 aaKnown RBP14.91□□□□□ -0.02
SNPH-201ENST00000381867 GDAQ9Y2T3 454 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 ZHX2Q9Y6X8 837 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 KRT38O76015 456 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 SURF1Q15526 300 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 RSRC2Q7L4I2 434 aaKnown RBP14.91□□□□□ -0.02
SNPH-201ENST00000381867 SMYD3Q9H7B4 428 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 ETNK1Q9HBU6 452 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 FAM8A1Q9UBU6 413 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 PCYT1AP49585 367 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 RAD23BP54727 409 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 R3HDM1Q15032 1099 aaKnown RBP14.91□□□□□ -0.02
SNPH-201ENST00000381867 TMEM259Q4ZIN3 620 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 TAF1BQ53T94 588 aaPredicted RBP14.91□□□□□ -0.02
SNPH-201ENST00000381867 ANO5Q75V66 913 aa14.91□□□□□ -0.02
SNPH-201ENST00000381867 TARSL2A2RTX5 802 aaKnown RBP14.9□□□□□ -0.02
SNPH-201ENST00000381867 TYW5A2RUC4 315 aaKnown RBP14.9□□□□□ -0.02
SNPH-201ENST00000381867 C19orf81C9J6K1 198 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 TSTA3Q13630 321 aaPredicted RBP14.9□□□□□ -0.02
SNPH-201ENST00000381867 NAA30Q147X3 362 aaPredicted RBP14.9□□□□□ -0.02
SNPH-201ENST00000381867 SRLQ86TD4 932 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.9□□□□□ -0.02
SNPH-201ENST00000381867 AIFM3Q96NN9 605 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 TGS1Q96RS0 853 aaKnown RBP14.9□□□□□ -0.02
SNPH-201ENST00000381867 MTFR1LQ9H019 292 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 TRPV6Q9H1D0 765 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 MAGED2Q9UNF1 606 aaPredicted RBP14.9□□□□□ -0.02
SNPH-201ENST00000381867 ADGRG1Q9Y653 693 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 FAM83BQ5T0W9 1011 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 OR6B2Q6IFH4 312 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 FAM151AQ8WW52 585 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 RBM41Q96IZ5 413 aaKnown RBP14.9□□□□□ -0.02
SNPH-201ENST00000381867 VPS33BQ9H267 617 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 TAF1DQ9H5J8 278 aaPredicted RBP14.9□□□□□ -0.02
SNPH-201ENST00000381867 NYAP2Q9P242 653 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 SNAP23O00161 211 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 GYS1P13807 737 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 TAC1P20366 129 aa14.9□□□□□ -0.02
SNPH-201ENST00000381867 STXBP2Q15833 593 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms