RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 PDCD11Q14690 1871 aaKnown RBP12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 PIEZO1Q92508 2521 aa12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 DENND3A2RUS2 1198 aa12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 USO1O60763 962 aaKnown RBP12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 DGAT1O75907 488 aa12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 PDCP20941 246 aa12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 PDIA5Q14554 519 aa12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 ODR4Q5SWX8 454 aa12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 HAUS3Q68CZ6 603 aa12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 ASAP3Q8TDY4 903 aa12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 PSPC1Q8WXF1 523 aaKnown RBP12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 TGS1Q96RS0 853 aaKnown RBP12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 GCOM2Q9BZD3 368 aaPredicted RBP12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 UBE2ZQ9H832 354 aaPredicted RBP12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 RNF19AQ9NV58 838 aa12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 MTMR6Q9Y217 621 aa12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 HCN4Q9Y3Q4 1203 aa12.85□□□□□ -0.35
APOBEC3F-202ENST00000381565 XRCC6P12956 609 aaKnown RBP eCLIP12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 ATF7P17544 494 aaPredicted RBP12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 MUTP22033 750 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 GLRA2P23416 452 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 CDC25AP30304 524 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 ARL2P36404 184 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 CCT6AP40227 531 aaKnown RBP12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 FAM189BP81408 668 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 CDC42EP1Q00587 391 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 CAPSQ13938 189 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 IER5LQ5T953 404 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 FAM173BQ6P4H8 233 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 FAM43BQ6ZT52 329 aaPredicted RBP12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 SLC24A5Q71RS6 500 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 KCNK18Q7Z418 384 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 EXOC8Q8IYI6 725 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 SNX29Q8TEQ0 813 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 TCP11Q8WWU5 503 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 CLP1Q92989 425 aaKnown RBP12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 NACC1Q96RE7 527 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 GPRC5CQ9NQ84 441 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 C1orf112Q9NSG2 853 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 MUC6Q6W4X9 2439 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 WDFY4Q6ZS81 3184 aa12.84□□□□□ -0.35
APOBEC3F-202ENST00000381565 CITO14578 2027 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 VWA3AA6NCI4 1184 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 SRGAP2CP0DJJ0 459 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 IBSPP21815 317 aaPredicted RBP12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 SFPQP23246 707 aaKnown RBP eCLIP12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 GRIN1Q05586 938 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 PAN2Q504Q3 1202 aaKnown RBP12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 EPC2Q52LR7 807 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 FAM102BQ5T8I3 360 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 ARL6IP4Q66PJ3 421 aaKnown RBP12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 DTHD1Q6ZMT9 781 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 ZNF598Q86UK7 904 aaKnown RBP12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 HSCBQ8IWL3 235 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 CMTR2Q8IYT2 770 aaKnown RBP12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 FIBCD1Q8N539 461 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 RNF149Q8NC42 400 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 CCDC43Q96MW1 224 aaKnown RBP12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 RAB34Q9BZG1 259 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 POLR3FQ9H1D9 316 aaPredicted RBP12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 RYDENQ9NUL5 291 aaKnown RBP12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 AGPAT5Q9NUQ2 364 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 DDX19AQ9NUU7 478 aaKnown RBP12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 TMEM161AQ9NX61 479 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 HCSTQ9UBK5 93 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 KIAA1024Q9UPX6 916 aa12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 MRPL42Q9Y6G3 142 aaKnown RBP12.83□□□□□ -0.36
APOBEC3F-202ENST00000381565 E9PMD0 336 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 STX6O43752 255 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 STAG3L1P0CL83 205 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 FGFR1P11362 822 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 IL9P15248 144 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 PTENP60484 403 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 MBTD1Q05BQ5 628 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 BTG3Q14201 252 aaPredicted RBP12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 PTPAQ15257 358 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 SF3A1Q15459 793 aaKnown RBP12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 LEXMQ3ZCV2 418 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 HYIQ5T013 277 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 SRGAP1Q7Z6B7 1085 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 ECHDC2Q86YB7 292 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 FAM178BQ8IXR5 827 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 TMEM192Q8IY95 271 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 LRRC15Q8TF66 581 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 BSNDQ8WZ55 320 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 SAMD11Q96NU1 681 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 PNMA5Q96PV4 448 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 BHMT2Q9H2M3 363 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 ELAC1Q9H777 363 aaKnown RBP12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 PIN4Q9Y237 131 aaKnown RBP12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 CLIC4Q9Y696 253 aa12.82□□□□□ -0.36
APOBEC3F-202ENST00000381565 TRIOO75962 3097 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 A0A0U1RQF3 1178 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 C5orf67F2Z3F1 127 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 ASAP2O43150 1006 aa12.81□□□□□ -0.36
APOBEC3F-202ENST00000381565 ZSCAN20P17040 1043 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms