RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 CPDO75976 1380 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 PNMA6FA0A0J9YX94 578 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 TMEM120BA0PK00 339 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 TTC4O95801 387 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ARSEP51690 589 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 COPS2P61201 443 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ZBTB17Q13105 803 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 CTTNQ14247 550 aaKnown RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 DNAJC24Q6P3W2 148 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 JDP2Q8WYK2 163 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 TMEM47Q9BQJ4 181 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 VCPKMTQ9H867 229 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 FGFR1OP2Q9NVK5 253 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 PCDHA6Q9UN73 950 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 PCDHA8Q9Y5H6 950 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ADGRL3Q9HAR2 1447 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 GOLGA8QA0A0J9YX86 632 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 GOLGA8OA6NCC3 632 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 GOLGA8NF8WBI6 632 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 KRT10P13645 584 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 SLC9A1P19634 815 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 CCND1P24385 295 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 MXI1P50539 228 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 GALCP54803 685 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 MDM2Q00987 491 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 PRKG1Q13976 671 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 SLFN13Q68D06 897 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 TEX9Q8N6V9 391 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 MCUQ8NE86 351 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 RIOK1Q9BRS2 568 aaKnown RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 IRAK4Q9NWZ3 460 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 RFX7Q2KHR2 1363 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 WDR17Q8IZU2 1322 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ENO1P06733 434 aaKnown RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 KRT4P19013 534 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 VAMP7P51809 220 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 KIAA1755Q5JYT7 1200 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 OLFML2BQ68BL8 750 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 GIMAP8Q8ND71 665 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 CHURC1Q8WUH1 139 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 CCDC124Q96CT7 223 aaKnown RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 TRIM51Q9BSJ1 452 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.47□□□□□ -1.693e-6■■■■■ 27.2
BRCA2-201ENST00000380152 MRPL11Q9Y3B7 192 aaKnown RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ZNF711Q9Y462 761 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ERCC6L2Q5T890 1561 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 SRGAP2CP0DJJ0 459 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 CDC25CP30307 473 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 GNA15P30679 374 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ITKQ08881 620 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 JADE1Q6IE81 842 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ACCSQ96QU6 501 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 SLITRK6Q9H5Y7 841 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 G3BP2Q9UN86 482 aaKnown RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ARL2BPQ9Y2Y0 163 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 PREX1Q8TCU6 1659 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 NEXMIFQ5QGS0 1516 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 A0A1W2PQJ5 194 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 CCT8L1PA6NM43 557 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ZBBXA8MT70 800 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 CYP2D6P10635 497 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ARFIP2P53365 341 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 PDIA2Q13087 525 aaKnown RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 EZH2Q15910 746 aaKnown RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 GRAMD4Q6IC98 578 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 RFFLQ8WZ73 363 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ERP44Q9BS26 406 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ISCUQ9H1K1 167 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 KIF9Q9HAQ2 790 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 HAO1Q9UJM8 370 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 CDH16O75309 829 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 GPC4O75487 556 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 NR3C1P04150 777 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 MYBL1P10243 752 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 PDHBP11177 359 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 KCNA3P22001 575 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 SLC12A1Q13621 1099 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 NAB2Q15742 525 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 C3orf62Q6ZUJ4 267 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ATG9AQ7Z3C6 839 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 DGKHQ86XP1 1220 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 HDAC7Q8WUI4 952 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 PRPF31Q8WWY3 499 aaKnown RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 FAF2Q96CS3 445 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 DLGAP2Q9P1A6 1054 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 PTPRMP28827 1452 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 CEP170BQ9Y4F5 1589 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 NCAPD2Q15021 1401 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 LAMA4Q16363 1823 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 KRT3P12035 628 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 BMP3P12645 472 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 STAT3P40763 770 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 CAV1Q03135 178 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 SEMA3FQ13275 785 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 SH2D3AQ9BRG2 576 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 TRPV6Q9H1D0 765 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 PLAGL2Q9UPG8 496 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 HPS5Q9UPZ3 1129 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 F5H423 210 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms