RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 RDM1Q8NG50 284 aa23.46■■□□□ 1.35
TRIM54-202ENST00000380075 COG1Q8WTW3 980 aa23.46■■□□□ 1.35
TRIM54-202ENST00000380075 TAAR1Q96RJ0 339 aa23.46■■□□□ 1.35
TRIM54-202ENST00000380075 PDCD2LQ9BRP1 358 aa23.46■■□□□ 1.35
TRIM54-202ENST00000380075 R3HDMLQ9H3Y0 253 aa23.46■■□□□ 1.35
TRIM54-202ENST00000380075 ST6GALNAC4Q9H4F1 302 aa23.46■■□□□ 1.35
TRIM54-202ENST00000380075 VIPAS39Q9H9C1 493 aa23.46■■□□□ 1.35
TRIM54-202ENST00000380075 ST7Q9NRC1 585 aa23.46■■□□□ 1.35
TRIM54-202ENST00000380075 TCEAL9Q9UHQ7 104 aa23.46■■□□□ 1.35
TRIM54-202ENST00000380075 PNMA3Q9UL41 463 aa23.46■■□□□ 1.35
TRIM54-202ENST00000380075 INTUQ9ULD6 942 aa23.46■■□□□ 1.35
TRIM54-202ENST00000380075 K7ENM7 598 aa23.45■■□□□ 1.35
TRIM54-202ENST00000380075 OAS2P29728 719 aaKnown RBP23.45■■□□□ 1.35
TRIM54-202ENST00000380075 KRT76Q01546 638 aa23.45■■□□□ 1.35
TRIM54-202ENST00000380075 CRHR2Q13324 411 aa23.45■■□□□ 1.35
TRIM54-202ENST00000380075 COG2Q14746 738 aa23.45■■□□□ 1.35
TRIM54-202ENST00000380075 NFRKBQ6P4R8 1299 aa23.45■■□□□ 1.35
TRIM54-202ENST00000380075 SPATA4Q8NEY3 305 aa23.45■■□□□ 1.35
TRIM54-202ENST00000380075 TRERF1Q96PN7 1200 aa23.45■■□□□ 1.35
TRIM54-202ENST00000380075 WBP1LQ9NX94 342 aa23.45■■□□□ 1.35
TRIM54-202ENST00000380075 SAMM50Q9Y512 469 aa23.45■■□□□ 1.35
TRIM54-202ENST00000380075 VWA5AO00534 786 aa23.45■■□□□ 1.34
TRIM54-202ENST00000380075 CA12O43570 354 aa23.45■■□□□ 1.34
TRIM54-202ENST00000380075 PLS3P13797 630 aa23.45■■□□□ 1.34
TRIM54-202ENST00000380075 OAZ1P54368 228 aa23.45■■□□□ 1.34
TRIM54-202ENST00000380075 CASP8Q14790 479 aa23.45■■□□□ 1.34
TRIM54-202ENST00000380075 ACCSQ96QU6 501 aa23.45■■□□□ 1.34
TRIM54-202ENST00000380075 IWS1Q96ST2 819 aa23.45■■□□□ 1.34
TRIM54-202ENST00000380075 RMDN3Q96TC7 470 aa23.45■■□□□ 1.34
TRIM54-202ENST00000380075 PARK7Q99497 189 aaKnown RBP23.45■■□□□ 1.34
TRIM54-202ENST00000380075 PXMP2Q9NR77 195 aa23.45■■□□□ 1.34
TRIM54-202ENST00000380075 NAGPAQ9UK23 515 aa23.45■■□□□ 1.34
TRIM54-202ENST00000380075 EXOC3O60645 756 aa23.44■■□□□ 1.34
TRIM54-202ENST00000380075 PALMO75781 387 aa23.44■■□□□ 1.34
TRIM54-202ENST00000380075 CCDC172P0C7W6 258 aa23.44■■□□□ 1.34
TRIM54-202ENST00000380075 EIF2AK2P19525 551 aaKnown RBP23.44■■□□□ 1.34
TRIM54-202ENST00000380075 CYP2J2P51589 502 aa23.44■■□□□ 1.34
TRIM54-202ENST00000380075 CFAP221Q4G0U5 840 aa23.44■■□□□ 1.34
TRIM54-202ENST00000380075 VTI1AQ96AJ9 217 aa23.44■■□□□ 1.34
TRIM54-202ENST00000380075 CCDC43Q96MW1 224 aaKnown RBP23.44■■□□□ 1.34
TRIM54-202ENST00000380075 STK33Q9BYT3 514 aa23.44■■□□□ 1.34
TRIM54-202ENST00000380075 MAF1Q9H063 256 aa23.44■■□□□ 1.34
TRIM54-202ENST00000380075 HOMER2Q9NSB8 354 aa23.44■■□□□ 1.34
TRIM54-202ENST00000380075 PKD2L1Q9P0L9 805 aa23.44■■□□□ 1.34
TRIM54-202ENST00000380075 NENFQ9UMX5 172 aa23.44■■□□□ 1.34
TRIM54-202ENST00000380075 WDR64B1ANS9 1081 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 CES2O00748 559 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 PSMC5P62195 406 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 C2orf54Q08AI8 447 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 BFSP1Q12934 665 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 ALKBH5Q6P6C2 394 aaKnown RBP23.43■■□□□ 1.34
TRIM54-202ENST00000380075 ZFYVE28Q9HCC9 887 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 ANKEF1Q9NU02 776 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 GRID2IPA4D2P6 1211 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 SPDYE16A6NNV3 312 aaPredicted RBP23.43■■□□□ 1.34
TRIM54-202ENST00000380075 MAPK13O15264 365 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 MAFGO15525 162 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 PEX10O60683 326 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 N4BP1O75113 896 aaKnown RBP23.43■■□□□ 1.34
TRIM54-202ENST00000380075 KRT13P13646 458 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 YWHABP31946 246 aaKnown RBP23.43■■□□□ 1.34
TRIM54-202ENST00000380075 DSG3P32926 999 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 ENOX2Q16206 610 aaKnown RBP23.43■■□□□ 1.34
TRIM54-202ENST00000380075 MEI1Q5TIA1 1274 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 ARHGEF16Q5VV41 709 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 INTS8Q75QN2 995 aaKnown RBP23.43■■□□□ 1.34
TRIM54-202ENST00000380075 KSR1Q8IVT5 923 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 BEGAINQ9BUH8 593 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 HOXC10Q9NYD6 342 aa23.43■■□□□ 1.34
TRIM54-202ENST00000380075 A0A0A6YYK5 440 aaPredicted RBP23.42■■□□□ 1.34
TRIM54-202ENST00000380075 P4HA2O15460 535 aa23.42■■□□□ 1.34
TRIM54-202ENST00000380075 SOX5P35711 763 aa23.42■■□□□ 1.34
TRIM54-202ENST00000380075 GLE1Q53GS7 698 aaKnown RBP23.42■■□□□ 1.34
TRIM54-202ENST00000380075 ATG4CQ96DT6 458 aa23.42■■□□□ 1.34
TRIM54-202ENST00000380075 CCND2P30279 289 aa23.41■■□□□ 1.34
TRIM54-202ENST00000380075 MYL7Q01449 175 aa23.41■■□□□ 1.34
TRIM54-202ENST00000380075 GPRASP2Q96D09 838 aa23.41■■□□□ 1.34
TRIM54-202ENST00000380075 IKZF4Q9H2S9 585 aa23.41■■□□□ 1.34
TRIM54-202ENST00000380075 RNF146Q9NTX7 359 aa23.41■■□□□ 1.34
TRIM54-202ENST00000380075 MYH11P35749 1972 aa23.41■■□□□ 1.34
TRIM54-202ENST00000380075 NCK2O43639 380 aa23.41■■□□□ 1.34
TRIM54-202ENST00000380075 GTF2BQ00403 316 aa23.41■■□□□ 1.34
TRIM54-202ENST00000380075 CCNI2Q6ZMN8 369 aaPredicted RBP23.41■■□□□ 1.34
TRIM54-202ENST00000380075 SENP7Q9BQF6 1050 aa23.41■■□□□ 1.34
TRIM54-202ENST00000380075 PACSIN1Q9BY11 444 aa23.41■■□□□ 1.34
TRIM54-202ENST00000380075 INTS2Q9H0H0 1204 aaKnown RBP23.41■■□□□ 1.34
TRIM54-202ENST00000380075 RNF216Q9NWF9 866 aaPredicted RBP23.41■■□□□ 1.34
TRIM54-202ENST00000380075 APEX2Q9UBZ4 518 aa23.41■■□□□ 1.34
TRIM54-202ENST00000380075 CPA4Q9UI42 421 aa23.41■■□□□ 1.34
TRIM54-202ENST00000380075 F8VZ95 297 aa23.4■■□□□ 1.34
TRIM54-202ENST00000380075 MYCLP12524 364 aaPredicted RBP23.4■■□□□ 1.34
TRIM54-202ENST00000380075 CETN1Q12798 172 aa23.4■■□□□ 1.34
TRIM54-202ENST00000380075 ZNF746Q6NUN9 644 aaPredicted RBP23.4■■□□□ 1.34
TRIM54-202ENST00000380075 ZNF771Q7L3S4 317 aaPredicted RBP23.4■■□□□ 1.34
TRIM54-202ENST00000380075 NLRX1Q86UT6 975 aa23.4■■□□□ 1.34
TRIM54-202ENST00000380075 HVCN1Q96D96 273 aa23.4■■□□□ 1.34
TRIM54-202ENST00000380075 TXNRD2Q9NNW7 524 aa23.4■■□□□ 1.34
TRIM54-202ENST00000380075 SAGE1Q9NXZ1 904 aa23.4■■□□□ 1.34
TRIM54-202ENST00000380075 AJAP1Q9UKB5 411 aaPredicted RBP23.4■■□□□ 1.34
TRIM54-202ENST00000380075 ADGRA2Q96PE1 1338 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms