RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 CAPN6Q9Y6Q1 641 aa16.09■□□□□ 0.17
RAB3IP-203ENST00000378809 EMSYQ7Z589 1322 aa16.09■□□□□ 0.17
RAB3IP-203ENST00000378809 LCTP09848 1927 aa16.08■□□□□ 0.17
RAB3IP-203ENST00000378809 DOCK5Q9H7D0 1870 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 ANKRD63C9JTQ0 380 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 RBAK-RBAKDNI3L0D1 243 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 HNRNPDLO14979 420 aaKnown RBP16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 CNGA1P29973 690 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 COPB2P35606 906 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 GJA5P36382 358 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 GCLMP48507 274 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 CETN1Q12798 172 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 LY6KQ17RY6 165 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 WHAMMP3Q1A5X7 153 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 MAP1SQ66K74 1059 aaPredicted RBP16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 GPAT2Q6NUI2 795 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 IRF2BP2Q7Z5L9 587 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 EPC1Q9H2F5 836 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 DNAJC12Q9UKB3 198 aa16.08■□□□□ 0.16
RAB3IP-203ENST00000378809 BUB1O43683 1085 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 GFPT2O94808 682 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 ATG7O95352 703 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 POTEJP0CG39 1038 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 CYP2C8P10632 490 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 ATP4AP20648 1035 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 STAT1P42224 750 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 JAM2P57087 298 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 AMPD2Q01433 879 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 MKRN3Q13064 507 aaKnown RBP16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 ZNF571Q7Z3V5 609 aaPredicted RBP16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 SLC7A3Q8WY07 619 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 POMGNT1Q8WZA1 660 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 TMEM143Q96AN5 459 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 NTPCRQ9BSD7 190 aaKnown RBP16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 APEX2Q9UBZ4 518 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 ADGRA3Q8IWK6 1321 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 SRGAP2O75044 1071 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 ADSSP30520 456 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 SNRNP35Q16560 246 aaKnown RBP16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 TRAPPC11Q7Z392 1133 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 VPS36Q86VN1 386 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 CBWD2Q8IUF1 395 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 PDLIM7Q9NR12 457 aa16.07■□□□□ 0.16
RAB3IP-203ENST00000378809 CTAGE15A4D2H0 777 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 PJA2O43164 708 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 N4BP1O75113 896 aaKnown RBP16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 CTAGE8P0CG41 777 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 TGFB3P10600 412 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 TCF7P36402 384 aaPredicted RBP16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 ERVK-9P63128 1117 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 PPP3CAQ08209 521 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 DRAP1Q14919 205 aaPredicted RBP16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 ARHGAP44Q17R89 818 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 KIAA0753Q2KHM9 967 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 LDLRAD1Q5T700 205 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 FAM160B1Q5W0V3 765 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 METTL7BQ6UX53 244 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 RSRC2Q7L4I2 434 aaKnown RBP16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 CTAGE6Q86UF2 777 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 CTAGE4Q8IX94 777 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 TMEM174Q8WUU8 243 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 CCDC127Q96BQ5 260 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 CAPZA3Q96KX2 299 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 NOX5Q96PH1 765 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 PNMA3Q9UL41 463 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 ZC3H4Q9UPT8 1303 aaKnown RBP16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 GSTTP1A0A1W2PQM5 241 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 ANO9A1A5B4 782 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 F8VZ95 297 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 NOP56O00567 594 aaKnown RBP16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 ADRB2P07550 413 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 FERP16591 822 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 STAT5BP51692 787 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 RTP1P59025 263 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 FBXO16Q8IX29 292 aaPredicted RBP16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 STK33Q9BYT3 514 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 MROH8Q9H579 483 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 AZI2Q9H6S1 392 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 ARGLU1Q9NWB6 273 aaPredicted RBP16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 SALL4Q9UJQ4 1053 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 JRKLQ9Y4A0 524 aa16.06■□□□□ 0.16
RAB3IP-203ENST00000378809 LRRIQ4A6NIV6 560 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 H0YCG3 227 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 EVI5O60447 810 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 MARK3P27448 753 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 SOX5P35711 763 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 MXI1P50539 228 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 PAPD7Q5XG87 772 aaKnown RBP16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 GPR161Q8N6U8 529 aaKnown RBP16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 CAGE1Q8TC20 777 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 SEPT1Q8WYJ6 367 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 RABGGTAQ92696 567 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 GLG1Q92896 1179 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 PACSIN1Q9BY11 444 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 EFCC1Q9HA90 598 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 NRBP2Q9NSY0 501 aa16.05■□□□□ 0.16
RAB3IP-203ENST00000378809 IGKV6D-21A0A0A0MT36 114 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 MAPK13O15264 365 aa16.04■□□□□ 0.16
RAB3IP-203ENST00000378809 LRRN2O75325 713 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms