RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 RETREG2Q8NC44 543 aa15.49■□□□□ 0.07
TPM2-204ENST00000378300 JPH2Q9BR39 696 aaPredicted RBP15.49■□□□□ 0.07
TPM2-204ENST00000378300 SPTLC3Q9NUV7 552 aa15.49■□□□□ 0.07
TPM2-204ENST00000378300 TBX20Q9UMR3 447 aa15.49■□□□□ 0.07
TPM2-204ENST00000378300 GRIN2DO15399 1336 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 MBLAC1A4D2B0 266 aaPredicted RBP15.48■□□□□ 0.07
TPM2-204ENST00000378300 KIF20AO95235 890 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 ADCY5O95622 1261 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 HOXC8P31273 242 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 DNM2P50570 870 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 ACLYP53396 1101 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 LRRC63Q05C16 580 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 LRRC55Q6ZSA7 311 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 STXBP4Q6ZWJ1 553 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 KIAA0319LQ8IZA0 1049 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 RNF149Q8NC42 400 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 DEPTORQ8TB45 409 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 NLRP4Q96MN2 994 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 PAK6Q9NQU5 681 aaPredicted RBP15.48■□□□□ 0.07
TPM2-204ENST00000378300 TRAF3IP3Q9Y228 551 aa15.48■□□□□ 0.07
TPM2-204ENST00000378300 C17orf102A2RUQ5 167 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 PDXKO00764 312 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 CLIC2O15247 247 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 EDN1P05305 212 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 CCL5P13501 91 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 MXD4Q14582 209 aaPredicted RBP15.47■□□□□ 0.07
TPM2-204ENST00000378300 PPP2R5AQ15172 486 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 PCSK9Q8NBP7 692 aaKnown RBP15.47■□□□□ 0.07
TPM2-204ENST00000378300 MYRIPQ8NFW9 859 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 DEFB118Q96PH6 123 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 FAM49AQ9H0Q0 323 aaPredicted RBP15.47■□□□□ 0.07
TPM2-204ENST00000378300 RNF208Q9H0X6 261 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 TYW1Q9NV66 732 aaKnown RBP15.47■□□□□ 0.07
TPM2-204ENST00000378300 AKT3Q9Y243 479 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 UBE4BO95155 1302 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 GTF2F1P35269 517 aaKnown RBP eCLIP15.47■□□□□ 0.07
TPM2-204ENST00000378300 TPM4P67936 248 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 TMEM62Q0P6H9 643 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 CREBRFQ8IUR6 639 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 MAP4K3Q8IVH8 894 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 SYCP3Q8IZU3 236 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 SLC17A8Q8NDX2 589 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 ACCSQ96QU6 501 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 TSG101Q99816 390 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 GBP3Q9H0R5 595 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 AGPAT3Q9NRZ7 376 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 GTF2IRD1Q9UHL9 959 aa15.47■□□□□ 0.07
TPM2-204ENST00000378300 ANKRD63C9JTQ0 380 aa15.46■□□□□ 0.07
TPM2-204ENST00000378300 CSDE1O75534 798 aaKnown RBP15.46■□□□□ 0.07
TPM2-204ENST00000378300 CYP2C9P11712 490 aa15.46■□□□□ 0.07
TPM2-204ENST00000378300 TMOD1P28289 359 aa15.46■□□□□ 0.07
TPM2-204ENST00000378300 CTCFP49711 727 aaPredicted RBP15.46■□□□□ 0.07
TPM2-204ENST00000378300 ALCAMQ13740 583 aa15.46■□□□□ 0.07
TPM2-204ENST00000378300 FAM47CQ5HY64 1035 aa15.46■□□□□ 0.07
TPM2-204ENST00000378300 GDF6Q6KF10 455 aaPredicted RBP15.46■□□□□ 0.07
TPM2-204ENST00000378300 APTXQ7Z2E3 356 aaKnown RBP15.46■□□□□ 0.07
TPM2-204ENST00000378300 MINDY3Q9H8M7 445 aa15.46■□□□□ 0.07
TPM2-204ENST00000378300 IFT122Q9HBG6 1241 aa15.46■□□□□ 0.07
TPM2-204ENST00000378300 A0A087WZ62 844 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 TTLL13PA6NNM8 815 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 KCNJ18B7U540 433 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 NR3C1P04150 777 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 CDK11BP21127 795 aaKnown RBP15.45■□□□□ 0.06
TPM2-204ENST00000378300 NR2F2P24468 414 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 FANCCQ00597 558 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 FKBP3Q00688 224 aaKnown RBP15.45■□□□□ 0.06
TPM2-204ENST00000378300 ADAM9Q13443 819 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 KCNJ12Q14500 433 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 EDRF1Q3B7T1 1238 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 CDCA2Q69YH5 1023 aaPredicted RBP15.45■□□□□ 0.06
TPM2-204ENST00000378300 SLC39A4Q6P5W5 647 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 DNAJB3Q8WWF6 145 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 VTI1AQ96AJ9 217 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 CTAGE1Q96RT6 745 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 FDXACB1Q9BRP7 624 aaPredicted RBP15.45■□□□□ 0.06
TPM2-204ENST00000378300 TRIM5Q9C035 493 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 CCDC113Q9H0I3 377 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 THAP9Q9H5L6 903 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 TMEM206Q9H813 350 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 IFNKQ9P0W0 207 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 SIP14410 1827 aa15.45■□□□□ 0.06
TPM2-204ENST00000378300 SMIM35A0A1B0GVV1 85 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 K7ERI5 159 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 ASAP2O43150 1006 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 CALUO43852 315 aaPredicted RBP15.44■□□□□ 0.06
TPM2-204ENST00000378300 IQCF3P0C7M6 154 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 NLRP11P59045 1033 aaKnown RBP15.44■□□□□ 0.06
TPM2-204ENST00000378300 NOLC1Q14978 699 aaKnown RBP eCLIP15.44■□□□□ 0.06
TPM2-204ENST00000378300 KIZQ2M2Z5 673 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 TCP11X2Q5H9J9 407 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 FBXO46Q6PJ61 603 aaPredicted RBP15.44■□□□□ 0.06
TPM2-204ENST00000378300 FOXR2Q6PJQ5 311 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 SARM1Q6SZW1 724 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 PPP4R3CPQ6ZMV5 832 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 ZC3H3Q8IXZ2 948 aaKnown RBP15.44■□□□□ 0.06
TPM2-204ENST00000378300 ARRDC4Q8NCT1 418 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 ZSWIM2Q8NEG5 633 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 WNT8BQ93098 351 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 HVCN1Q96D96 273 aa15.44■□□□□ 0.06
TPM2-204ENST00000378300 CBWD1Q9BRT8 395 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms