RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CUEDC2Q9H467 287 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 ABCB6Q9NP58 842 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 HSPBP1Q9NZL4 362 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 PCSK1NQ9UHG2 260 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 CDC23Q9UJX2 597 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 MYL3P08590 195 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 VAMP7P51809 220 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 ARPP19P56211 112 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 PSMC5P62195 406 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 LRRC63Q05C16 580 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 HSDL1Q3SXM5 330 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 ZNF568Q3ZCX4 644 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 AADACL2Q6P093 401 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 MIS18BP1Q6P0N0 1132 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 TATDN1Q6P1N9 297 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 SLC16A10Q8TF71 515 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 GMCL1Q96IK5 515 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 CPB2Q96IY4 423 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 ACCSQ96QU6 501 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 NUP58Q9BVL2 599 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 NMRK2Q9NPI5 230 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 TTC7AQ9ULT0 858 aaPredicted RBP8.77□□□□□ -1.01
CKAP2-203ENST00000378037 RP1L1Q8IWN7 2480 aaPredicted RBP8.77□□□□□ -1.01
CKAP2-203ENST00000378037 FOXN3O00409 490 aaPredicted RBP8.77□□□□□ -1.01
CKAP2-203ENST00000378037 KCNJ1P48048 391 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 TGFB2P61812 414 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 BEX3Q00994 111 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 TAF1CQ15572 869 aaPredicted RBP8.77□□□□□ -1.01
CKAP2-203ENST00000378037 RPUSD2Q8IZ73 545 aaKnown RBP8.77□□□□□ -1.01
CKAP2-203ENST00000378037 CEP112Q8N8E3 955 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 C7orf43Q8WVR3 580 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 FAM149B1Q96BN6 582 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 MLXIPLQ9NP71 852 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 PXMP2Q9NR77 195 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 AGPAT3Q9NRZ7 376 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 ASIC3Q9UHC3 531 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 CHD4Q14839 1912 aa8.77□□□□□ -1.01
CKAP2-203ENST00000378037 PVALEFA0A1B0GWK0 134 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 GOLGA6L10A6NI86 522 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 ANKRD63C9JTQ0 380 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 EIF3JO75822 258 aaKnown RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 BCRP11274 1271 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 ADCYAP1R1P41586 468 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 PSMC4P43686 418 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 RARRES1P49788 294 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 HERVK_113P62684 666 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 VSNL1P62760 191 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 BMS1Q14692 1282 aaKnown RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 EPHA7Q15375 998 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 NETO2Q8NC67 525 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 TAS1R2Q8TE23 839 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 HASPINQ8TF76 798 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 RNF25Q96BH1 459 aaPredicted RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 DNAJC19Q96DA6 116 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 EHD4Q9H223 541 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 RSPH14Q9UHP6 348 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 NFU1Q9UMS0 254 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 hCG_1984214I3L0E3 225 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 OPLAHO14841 1288 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 CCNE2O96020 404 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 RARBP10826 455 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 CAPN2P17655 700 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 NPTX2P47972 431 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 RGS7P49802 495 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 HDLBPQ00341 1268 aaKnown RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 TRIM14Q14142 442 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 SNRNP35Q16560 246 aaKnown RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 WDR72Q3MJ13 1102 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 CDKAL1Q5VV42 579 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 DENND2CQ68D51 928 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 SH3RF1Q7Z6J0 888 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 ZNF713Q8N859 430 aaPredicted RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 SYT2Q8N9I0 419 aaPredicted RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 AFG1LQ8WV93 481 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 NT5C1BQ96P26 610 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 CELF4Q9BZC1 486 aaKnown RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 TYW1Q9NV66 732 aaKnown RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 TNRC6CQ9HCJ0 1690 aaKnown RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 GOLGA8MH3BSY2 632 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 N4BP1O75113 896 aaKnown RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 FTLP02792 175 aaPredicted RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 PDGFRBP09619 1106 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 RAP1GAPP47736 663 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 LACTBP83111 547 aaPredicted RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 PPATQ06203 517 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 HDAC7Q8WUI4 952 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 TATDN2Q93075 761 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 SELENOSQ9BQE4 189 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 BPIFA3Q9BQP9 254 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 INTS2Q9H0H0 1204 aaKnown RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 RBAKQ9NYW8 714 aaPredicted RBP8.76□□□□□ -1.01
CKAP2-203ENST00000378037 CACNG4Q9UBN1 327 aa8.76□□□□□ -1.01
CKAP2-203ENST00000378037 C10orf71Q711Q0 1435 aa8.75□□□□□ -1.01
CKAP2-203ENST00000378037 ESYT2A0FGR8 921 aa8.75□□□□□ -1.01
CKAP2-203ENST00000378037 PIAS1O75925 651 aa8.75□□□□□ -1.01
CKAP2-203ENST00000378037 FGGP02679 453 aa8.75□□□□□ -1.01
CKAP2-203ENST00000378037 CYP3A4P08684 503 aa8.75□□□□□ -1.01
CKAP2-203ENST00000378037 YBX3P16989 372 aaKnown RBP eCLIP8.75□□□□□ -1.013e-7■■□□□ 13.9
CKAP2-203ENST00000378037 KCNB1Q14721 858 aa8.75□□□□□ -1.01
CKAP2-203ENST00000378037 ZBTB41Q5SVQ8 909 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms