RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GIT2Q14161 759 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 FAM187BQ17R55 369 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.63□□□□□ -0.07
CKAP2-202ENST00000378034 SLC24A5Q71RS6 500 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 RTN4RL1Q86UN2 441 aaPredicted RBP14.63□□□□□ -0.07
CKAP2-202ENST00000378034 HERC6Q8IVU3 1022 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 TOP1MTQ969P6 601 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 DHX58Q96C10 678 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 PRIMPOLQ96LW4 560 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 ADAM2Q99965 735 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 REEP2Q9BRK0 252 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 TRAIPQ9BWF2 469 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 MINDY3Q9H8M7 445 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 GDPD2Q9HCC8 539 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 AGPAT5Q9NUQ2 364 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 KBTBD4Q9NVX7 518 aa14.63□□□□□ -0.07
CKAP2-202ENST00000378034 INO80B-WBP1J3KQ70 363 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 CSDE1O75534 798 aaKnown RBP14.62□□□□□ -0.07
CKAP2-202ENST00000378034 ERLIN2O94905 339 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 FGFR4P22455 802 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 NPTX2P47972 431 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 ZNF131P52739 623 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 SMTNP53814 917 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 PEX3P56589 373 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 DEFB103AP81534 67 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 PPP4R3CPQ6ZMV5 832 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 LINC01599Q8WXQ3 324 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 PRMT7Q9NVM4 692 aaPredicted RBP14.62□□□□□ -0.07
CKAP2-202ENST00000378034 HPSEQ9Y251 543 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 PTPRSQ13332 1948 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 NPHP3-ACAD11A0A0J9YXS1 232 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 GOLGA6L4A6NEF3 574 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 H0YCG3 227 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 TBCAO75347 108 aaKnown RBP14.62□□□□□ -0.07
CKAP2-202ENST00000378034 FAM13AO94988 1023 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 STAG3L1P0CL83 205 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 PFKFB1P16118 471 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 SARSP49591 514 aaKnown RBP14.62□□□□□ -0.07
CKAP2-202ENST00000378034 FAM189BP81408 668 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 RAD51AP2Q09MP3 1159 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 RAB30Q15771 203 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 MYOCDQ8IZQ8 938 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 MRPS27Q92552 414 aaKnown RBP14.62□□□□□ -0.07
CKAP2-202ENST00000378034 DDX12PQ92771 950 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 KCNN1Q92952 543 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 CCDC51Q96ER9 411 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 FZD8Q9H461 694 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 TMEM134Q9H6X4 195 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 PARVGQ9HBI0 331 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 POLD4Q9HCU8 107 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 KMT5AQ9NQR1 393 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 PCDHA11Q9Y5I1 949 aa14.62□□□□□ -0.07
CKAP2-202ENST00000378034 TTC3P53804 2025 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 A0A1B0GVL5 298 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 MYMKA6NI61 221 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 CCDC169A6NNP5 214 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 C9IYK1 514 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 MGEA5O60502 916 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 GJB5O95377 273 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 SKIP12755 728 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 ABCD1P33897 745 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 MAPK6Q16659 721 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 CNNM4Q6P4Q7 775 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 NPAS4Q8IUM7 802 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 SLC17A8Q8NDX2 589 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 ELAC1Q9H777 363 aaKnown RBP14.61□□□□□ -0.07
CKAP2-202ENST00000378034 ARHGAP28Q9P2N2 729 aa14.61□□□□□ -0.07
CKAP2-202ENST00000378034 PIN4Q9Y237 131 aaKnown RBP14.61□□□□□ -0.07
CKAP2-202ENST00000378034 TRIOBPQ9H2D6 2365 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 SFI1A8K8P3 1242 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 TSPAN1O60635 241 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 SLFN14P0C7P3 912 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 AMHR2Q16671 573 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 GPR153Q6NV75 609 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 CEP57L1Q8IYX8 460 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 FSIP1Q8NA03 581 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 DNAJC19Q96DA6 116 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 ZBED2Q9BTP6 218 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 CCDC113Q9H0I3 377 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 SEL1LQ9UBV2 794 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 MSRAQ9UJ68 235 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 RANBP2P49792 3224 aaKnown RBP14.6□□□□□ -0.07
CKAP2-202ENST00000378034 A0A0U1RQF3 1178 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 K7ERI5 159 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 ACKR2O00590 384 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 GAP43P17677 238 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 HOXA11P31270 313 aaPredicted RBP14.6□□□□□ -0.07
CKAP2-202ENST00000378034 SYKP43405 635 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 RAB27AP51159 221 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 CACNB1Q02641 598 aaPredicted RBP14.6□□□□□ -0.07
CKAP2-202ENST00000378034 FAM109BQ6ICB4 259 aaPredicted RBP14.6□□□□□ -0.07
CKAP2-202ENST00000378034 NOTUMQ6P988 496 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 DYMQ7RTS9 669 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 CRIPAKQ8N1N5 446 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 MYCT1Q8N699 235 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 RAD9AQ99638 391 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 INSL6Q9Y581 213 aa14.6□□□□□ -0.07
CKAP2-202ENST00000378034 ADGRA3Q8IWK6 1321 aa14.59□□□□□ -0.07
CKAP2-202ENST00000378034 GRXCR1A8MXD5 290 aa14.59□□□□□ -0.07
CKAP2-202ENST00000378034 EOMESO95936 686 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms