RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ATP6V0A1Q93050 837 aa9.38□□□□□ -0.91
PCDH9-202ENST00000377865 COMMD10Q9Y6G5 202 aa9.38□□□□□ -0.91
PCDH9-202ENST00000377865 KAT6BQ8WYB5 2073 aa9.38□□□□□ -0.91
PCDH9-202ENST00000377865 HNRNPDLO14979 420 aaKnown RBP9.38□□□□□ -0.91
PCDH9-202ENST00000377865 DNAJC8O75937 253 aaPredicted RBP9.38□□□□□ -0.91
PCDH9-202ENST00000377865 PLEKP08567 350 aaPredicted RBP9.38□□□□□ -0.91
PCDH9-202ENST00000377865 DIXDC1Q155Q3 683 aa9.38□□□□□ -0.91
PCDH9-202ENST00000377865 BRDTQ58F21 947 aaPredicted RBP9.38□□□□□ -0.91
PCDH9-202ENST00000377865 TRIM72Q6ZMU5 477 aa9.38□□□□□ -0.91
PCDH9-202ENST00000377865 FAM47EQ6ZV65 393 aa9.38□□□□□ -0.91
PCDH9-202ENST00000377865 TMEM139Q8IV31 216 aa9.38□□□□□ -0.91
PCDH9-202ENST00000377865 PDIK1LQ8N165 341 aa9.38□□□□□ -0.91
PCDH9-202ENST00000377865 SERPINI1Q99574 410 aa9.38□□□□□ -0.91
PCDH9-202ENST00000377865 APEX2Q9UBZ4 518 aa9.38□□□□□ -0.91
PCDH9-202ENST00000377865 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.38□□□□□ -0.91
PCDH9-202ENST00000377865 CHD2O14647 1828 aaKnown RBP9.38□□□□□ -0.91
PCDH9-202ENST00000377865 LMTK3Q96Q04 1460 aa9.38□□□□□ -0.91
PCDH9-202ENST00000377865 H7C0C1 242 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 BBOX1O75936 387 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 ATP5OP48047 213 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 PKN1Q16512 942 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 CRLF3Q8IUI8 442 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 ADGRF4Q8IZF3 695 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 KCNV2Q8TDN2 545 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 NLRP7Q8WX94 980 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 THOC1Q96FV9 657 aaKnown RBP9.37□□□□□ -0.91
PCDH9-202ENST00000377865 LACRTQ9GZZ8 138 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 CARD9Q9H257 536 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 DIAPH2O60879 1101 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 NQO1P15559 274 aaKnown RBP9.37□□□□□ -0.91
PCDH9-202ENST00000377865 MRPS35P82673 323 aaKnown RBP9.37□□□□□ -0.91
PCDH9-202ENST00000377865 ARHGAP4P98171 946 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 LRRC14Q15048 493 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 FOXR1Q6PIV2 292 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 ZBTB8OSQ8IWT0 167 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 MREGQ8N565 214 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 HPS3Q969F9 1004 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 MKNK1Q9BUB5 465 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 PABPC3Q9H361 631 aaKnown RBP9.37□□□□□ -0.91
PCDH9-202ENST00000377865 DDX56Q9NY93 547 aaKnown RBP9.37□□□□□ -0.91
PCDH9-202ENST00000377865 POTEFA5A3E0 1075 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 CDH16O75309 829 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 STAT2P52630 851 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 POTEGQ6S5H5 508 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 POTEEQ6S8J3 1075 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 TEX2Q8IWB9 1127 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 TRIM59Q8IWR1 403 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 ATL2Q8NHH9 583 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 KIAA1586Q9HCI6 787 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 FAM53CQ9NYF3 392 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 KCND2Q9NZV8 630 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 MAD2L2Q9UI95 211 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.37□□□□□ -0.91
PCDH9-202ENST00000377865 CENPPQ6IPU0 288 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 FGD4Q96M96 766 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 ARHGAP20Q9P2F6 1191 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 EPS15L1Q9UBC2 864 aa9.37□□□□□ -0.91
PCDH9-202ENST00000377865 PFDN1O60925 122 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 PBX1P40424 430 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 FNTAP49354 379 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 ARFIP2P53365 341 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 SWT1Q5T5J6 900 aaKnown RBP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 IZUMO3Q5VZ72 239 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 FAM160B2Q86V87 743 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 RHOT1Q8IXI2 618 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 METTL13Q8N6R0 699 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 MAML1Q92585 1016 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 IP6K2Q9UHH9 426 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 MID2Q9UJV3 735 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 FAF1Q9UNN5 650 aaPredicted RBP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 CASZ1Q86V15 1759 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 PPEF1O14829 653 aaPredicted RBP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 KRT37O76014 449 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 ASPHQ12797 758 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 DBN1Q16643 649 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 CREG2Q8IUH2 290 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 PRPF38AQ8NAV1 312 aaKnown RBP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 CCPG1Q9ULG6 757 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 DUSP10Q9Y6W6 482 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 A0A0G2JND7 137 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 ATP6V1G2O95670 118 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 CALB1P05937 261 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 KRT19P08727 400 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 AMPD2Q01433 879 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 NKX1-1Q15270 411 aaPredicted RBP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 SURF1Q15526 300 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 EZH2Q15910 746 aaKnown RBP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 PIP4K2CQ8TBX8 421 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 FAM167BQ9BTA0 163 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 SEMA6BQ9H3T3 888 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 EHD2Q9NZN4 543 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 DDX20Q9UHI6 824 aaKnown RBP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 DMGDHQ9UI17 866 aaKnown RBP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 IGF2BP3O00425 579 aaKnown RBP eCLIP9.36□□□□□ -0.91
PCDH9-202ENST00000377865 COPEO14579 308 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 P4HA2O15460 535 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 PDHA1P08559 390 aa9.36□□□□□ -0.91
PCDH9-202ENST00000377865 FMO5P49326 533 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms