RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 ZBP1Q9H171 429 aa19.56■□□□□ 0.72
HLA-A-201ENST00000376802 NRDE2Q9H7Z3 1164 aa19.56■□□□□ 0.72
HLA-A-201ENST00000376802 TBC1D13Q9NVG8 400 aa19.56■□□□□ 0.72
HLA-A-201ENST00000376802 PIN4Q9Y237 131 aaKnown RBP19.56■□□□□ 0.72
HLA-A-201ENST00000376802 ZC3H11AO75152 810 aaKnown RBP eCLIP19.55■□□□□ 0.72
HLA-A-201ENST00000376802 CXCL14O95715 111 aa19.55■□□□□ 0.72
HLA-A-201ENST00000376802 QARSP47897 775 aaKnown RBP19.55■□□□□ 0.72
HLA-A-201ENST00000376802 PTPN21Q16825 1174 aa19.55■□□□□ 0.72
HLA-A-201ENST00000376802 CPLX2Q6PUV4 134 aaKnown RBP19.55■□□□□ 0.72
HLA-A-201ENST00000376802 NEK8Q86SG6 692 aa19.55■□□□□ 0.72
HLA-A-201ENST00000376802 VPS52Q8N1B4 723 aa19.55■□□□□ 0.72
HLA-A-201ENST00000376802 PRSS33Q8NF86 280 aa19.55■□□□□ 0.72
HLA-A-201ENST00000376802 OXER1Q8TDS5 423 aa19.55■□□□□ 0.72
HLA-A-201ENST00000376802 AUTS2Q8WXX7 1259 aa19.55■□□□□ 0.72
HLA-A-201ENST00000376802 RSPH1Q8WYR4 309 aa19.55■□□□□ 0.72
HLA-A-201ENST00000376802 CASP10Q92851 521 aa19.55■□□□□ 0.72
HLA-A-201ENST00000376802 TMEM169Q96HH4 297 aa19.55■□□□□ 0.72
HLA-A-201ENST00000376802 ADAM7Q9H2U9 754 aa19.55■□□□□ 0.72
HLA-A-201ENST00000376802 DHX33Q9H6R0 707 aaKnown RBP19.55■□□□□ 0.72
HLA-A-201ENST00000376802 B4GALT3O60512 393 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 SKIP12755 728 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 SP100P23497 879 aaPredicted RBP19.54■□□□□ 0.72
HLA-A-201ENST00000376802 TPRNQ4KMQ1 711 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 NOMO2Q5JPE7 1267 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 EARS2Q5JPH6 523 aaKnown RBP19.54■□□□□ 0.72
HLA-A-201ENST00000376802 GLB1LQ6UWU2 654 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 CATSPER4Q7RTX7 472 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 DDX53Q86TM3 631 aaKnown RBP19.54■□□□□ 0.72
HLA-A-201ENST00000376802 FBXL6Q8N531 539 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 PRPF31Q8WWY3 499 aaKnown RBP19.54■□□□□ 0.72
HLA-A-201ENST00000376802 IGSF21Q96ID5 467 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 JPH2Q9BR39 696 aaPredicted RBP19.54■□□□□ 0.72
HLA-A-201ENST00000376802 VN1R3Q9BXE9 311 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 POMKQ9H5K3 350 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 MINDY3Q9H8M7 445 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 AGPAT5Q9NUQ2 364 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 DNAJB4Q9UDY4 337 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 IRAK3Q9Y616 596 aa19.54■□□□□ 0.72
HLA-A-201ENST00000376802 CCDC194A0A1B0GVG4 234 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 CTDNEP1O95476 244 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 P4HBP07237 508 aaKnown RBP19.53■□□□□ 0.72
HLA-A-201ENST00000376802 GALTP07902 379 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 HOXA11P31270 313 aaPredicted RBP19.53■□□□□ 0.72
HLA-A-201ENST00000376802 RAB27AP51159 221 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 POLGP54098 1239 aaPredicted RBP19.53■□□□□ 0.72
HLA-A-201ENST00000376802 ITIH3Q06033 890 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 SPIRE1Q08AE8 756 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 AGMOQ6ZNB7 445 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 ZNF280BQ86YH2 543 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 TMEM143Q96AN5 459 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 SLKQ9H2G2 1235 aaPredicted RBP19.53■□□□□ 0.72
HLA-A-201ENST00000376802 TPCN1Q9ULQ1 816 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 PCDHB2Q9Y5E7 798 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 COL4A3BPQ9Y5P4 624 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 STK36Q9NRP7 1315 aa19.53■□□□□ 0.72
HLA-A-201ENST00000376802 ZBTB39O15060 712 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 TBX3O15119 743 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 CCNT1O60563 726 aaKnown RBP19.52■□□□□ 0.72
HLA-A-201ENST00000376802 GCFC2P16383 781 aaKnown RBP19.52■□□□□ 0.72
HLA-A-201ENST00000376802 SLC11A1P49279 550 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 AFF1P51825 1210 aaKnown RBP19.52■□□□□ 0.72
HLA-A-201ENST00000376802 UBXN11Q5T124 520 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 KANK3Q6NY19 840 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 PIK3AP1Q6ZUJ8 805 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 MRPL10Q7Z7H8 261 aaKnown RBP19.52■□□□□ 0.72
HLA-A-201ENST00000376802 C4orf19Q8IY42 314 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 C12orf76Q8N812 135 aaPredicted RBP19.52■□□□□ 0.72
HLA-A-201ENST00000376802 FEZF2Q8TBJ5 459 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 SLC22A17Q8WUG5 538 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 SLC7A3Q8WY07 619 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 CEP170P1Q96L14 293 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 PHOX2BQ99453 314 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 RGL1Q9NZL6 768 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 INPP5FQ9Y2H2 1132 aa19.52■□□□□ 0.72
HLA-A-201ENST00000376802 USP34Q70CQ2 3546 aa19.52■□□□□ 0.71
HLA-A-201ENST00000376802 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.51■□□□□ 0.71
HLA-A-201ENST00000376802 PFKFB2O60825 505 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 CDKL5O76039 1030 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 DDHD2O94830 711 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 WEE2P0C1S8 567 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 SRGAP2CP0DJJ0 459 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 CTSAP10619 480 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 EPCAMP16422 314 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 LAMTOR4Q0VGL1 99 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 EPHA7Q15375 998 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 SRGAP1Q7Z6B7 1085 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 SUGP1Q8IWZ8 645 aaKnown RBP19.51■□□□□ 0.71
HLA-A-201ENST00000376802 LXNQ9BS40 222 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 PPME1Q9Y570 386 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 DENND4AQ7Z401 1863 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 CACNA1HO95180 2353 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 FAM205CA6NFA0 338 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 C2CD4DB7Z1M9 353 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 DKC1O60832 514 aaKnown RBP eCLIP19.51■□□□□ 0.71
HLA-A-201ENST00000376802 CA8P35219 290 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 RFC5P40937 340 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 RNASELQ05823 741 aaKnown RBP19.51■□□□□ 0.71
HLA-A-201ENST00000376802 TCF15Q12870 199 aa19.51■□□□□ 0.71
HLA-A-201ENST00000376802 BMS1Q14692 1282 aaKnown RBP19.51■□□□□ 0.71
HLA-A-201ENST00000376802 CES5AQ6NT32 575 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms