RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 IL1RAPL1Q9NZN1 696 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 XPR1Q9UBH6 696 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 DNAJC12Q9UKB3 198 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 KCNA3P22001 575 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 RPP38P78345 283 aaKnown RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 ZSWIM7Q19AV6 140 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 SWI5Q1ZZU3 235 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 LONRF3Q496Y0 759 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 CCDC58Q4VC31 144 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 SNIP1Q8TAD8 396 aaKnown RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 YME1L1Q96TA2 773 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 PDE11AQ9HCR9 933 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 ATXN10Q9UBB4 475 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 PSDA5PKW4 1024 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 SNAP23O00161 211 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 FYNP06241 537 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 YWHAGP61981 247 aaKnown RBP eCLIP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 STX4Q12846 297 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 CAMK1Q14012 370 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 KLHL40Q2TBA0 621 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 HMBOX1Q6NT76 420 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 IZUMO1Q8IYV9 350 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 METTL13Q8N6R0 699 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 MAFIPQ8WZ33 124 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 THRSPQ92748 146 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 EXOC2Q96KP1 924 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 APOL6Q9BWW8 343 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 ELOVL6Q9H5J4 265 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 ENOPH1Q9UHY7 261 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 PSMD12O00232 456 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 IFRD1O00458 451 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 SLC26A4O43511 780 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 CYTH3O43739 400 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 ZNF12P17014 697 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 SAT1P21673 171 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 OSBPP22059 807 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 RGS2P41220 211 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 PPARAQ07869 468 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 ZNF544Q6NX49 715 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 DPP10Q8N608 796 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 SPATA5Q8NB90 893 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 SH3TC2Q8TF17 1288 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 SMYD3Q9H7B4 428 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 POLR1BQ9H9Y6 1135 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 NLRP2Q9NX02 1062 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 CEP72Q9P209 647 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 MYO1AQ9UBC5 1043 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 ADAM21Q9UKJ8 722 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 ARL5CA6NH57 179 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 SSX4O60224 188 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 RASGRP1O95267 797 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 ANP32DO95626 131 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 MLLT6P55198 1093 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 YWHAHQ04917 246 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 INPP5AQ14642 412 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 RPS6KA1Q15418 735 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 MAGED2Q9UNF1 606 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 RAD54L2Q9Y4B4 1467 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 MED26O95402 600 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 ZBED1O96006 694 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 ACAD11Q709F0 780 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 KRT27Q7Z3Y8 459 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PRUNE1Q86TP1 453 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 BACH2Q9BYV9 841 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 VTI1BQ9UEU0 232 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 CLEC4AQ9UMR7 237 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PMF1-BGLAPU3KQ54 211 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 TNIKQ9UKE5 1360 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 CIB4A0PJX0 185 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 FAM228BP0C875 321 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 IFRD2Q12894 506 aaPredicted RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PPP2R5BQ15173 497 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 MCUQ8NE86 351 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 KCTD4Q8WVF5 259 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 TRIM62Q9BVG3 475 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 MKNK2Q9HBH9 465 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 EXOSC4Q9NPD3 245 aaKnown RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 KRCC1Q9NPI7 259 aaPredicted RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 DDX18Q9NVP1 670 aaKnown RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 RRN3Q9NYV6 651 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 MTO1Q9Y2Z2 717 aaKnown RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 ARL5AQ9Y689 179 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PSMD11O00231 422 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 AHCYL1O43865 530 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 GARTP22102 1010 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 RHAGQ02094 409 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 ADCY2Q08462 1091 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 ADRM1Q16186 407 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 NAALADL2Q58DX5 795 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 TRIM67Q6ZTA4 783 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 DPH5Q9H2P9 285 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 XPO7Q9UIA9 1087 aaKnown RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 FARSAQ9Y285 508 aaKnown RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 ZNF891A8MT65 544 aaPredicted RBP6.3□□□□□ -1.4
SCN2A-202ENST00000375427 KPNA6O60684 536 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PDHA2P29803 388 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 ITGA1P56199 1179 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 BNIP1Q12981 228 aa6.3□□□□□ -1.4
SCN2A-202ENST00000375427 PKD2Q13563 968 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms