RNA–Protein interactions for RNA: ENST00000375120.3

OTUD3-201, Transcript of OTU deubiquitinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene OTUD3, Length 6,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD3-201ENST00000375120 USP17L18D6R9N7 530 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 USP17L22D6RA61 530 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 USP17L17D6RBQ6 530 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 USP17L19D6RCP7 530 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 USP17L20D6RJB6 530 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 POTEIP0CG38 1075 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 USP17L24Q0WX57 530 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 AP3B2Q13367 1082 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 RABGAP1LQ5R372 815 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 USP17L6PQ6QN14 398 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 POTEGQ6S5H5 508 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 POTEEQ6S8J3 1075 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 SLC13A1Q9BZW2 595 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 IL25Q9H293 177 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 TRABDQ9H4I3 376 aa16.58■□□□□ 0.25
OTUD3-201ENST00000375120 SLC4A1P02730 911 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 SOX5P35711 763 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 ALX1Q15699 326 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 ATP11CQ8NB49 1132 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 CFAP74Q9C0B2 1584 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 TRIM49P0CI25 452 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 TRIM49CP0CI26 452 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 TMEM270Q6UE05 265 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 RASSF3Q86WH2 238 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 FBXL13Q8NEE6 735 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 ADAM33Q9BZ11 813 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 NCOA3Q9Y6Q9 1424 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 STAT4Q14765 748 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 TMEM154Q6P9G4 183 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 SH3RF3Q8TEJ3 882 aaPredicted RBP16.58■□□□□ 0.24
OTUD3-201ENST00000375120 CEP19Q96LK0 163 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 EIF2AQ9BY44 585 aaKnown RBP16.58■□□□□ 0.24
OTUD3-201ENST00000375120 SPC25Q9HBM1 224 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 ROBO2Q9HCK4 1378 aa16.58■□□□□ 0.24
OTUD3-201ENST00000375120 RNF103-CHMP3A0A140T963 221 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 KPNA7A9QM74 516 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 SEMA3FQ13275 785 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 NCAPG2Q86XI2 1143 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 AGGF1Q8N302 714 aaeCLIP16.57■□□□□ 0.24
OTUD3-201ENST00000375120 ING2Q9H160 280 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 PCDHA6Q9UN73 950 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 PCDHA8Q9Y5H6 950 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 ERBB3P21860 1342 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 GSG1L2A8MUP6 293 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 COPS2P61201 443 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 SNX25Q9H3E2 840 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 BARHL2Q9NY43 387 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 HEY1Q9Y5J3 304 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 CCDC22O60826 627 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 POLD1P28340 1107 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 KDSRQ06136 332 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 NAALADL2Q58DX5 795 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 TMEM35BQ8NCS4 154 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 ARL8AQ96BM9 186 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 TRIM9Q9C026 710 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 TFR2Q9UP52 801 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 CLRN2A0PK11 232 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 CCT8L1PA6NM43 557 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 KCNA3P22001 575 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 USP49Q70CQ1 688 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 ERP27Q96DN0 273 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.57■□□□□ 0.24
OTUD3-201ENST00000375120 PITPNM2Q9BZ72 1349 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 TDP2O95551 362 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 ABCD1P33897 745 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 TFDP2Q14188 446 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 GRM4Q14833 912 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 SUSD4Q5VX71 490 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 DDX42Q86XP3 938 aaKnown RBP eCLIP16.57■□□□□ 0.246e-7■■■■■ 32.2
OTUD3-201ENST00000375120 MMGT1Q8N4V1 131 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 ADA2Q9NZK5 511 aa16.57■□□□□ 0.24
OTUD3-201ENST00000375120 PFASO15067 1338 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 ZBTB5O15062 677 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 KLC3Q6P597 504 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 PRPF31Q8WWY3 499 aaKnown RBP16.56■□□□□ 0.24
OTUD3-201ENST00000375120 POLR3CQ9BUI4 534 aaPredicted RBP16.56■□□□□ 0.24
OTUD3-201ENST00000375120 SSU72P8A0A1W2PR75 194 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 GTSE1Q9NYZ3 720 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 TRIM33Q9UPN9 1127 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 USP42Q9H9J4 1324 aaKnown RBP16.56■□□□□ 0.24
OTUD3-201ENST00000375120 ERVV-1B6SEH8 477 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 VAMP7P51809 220 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 TSTA3Q13630 321 aaPredicted RBP16.56■□□□□ 0.24
OTUD3-201ENST00000375120 ZBTB41Q5SVQ8 909 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 AKT3Q9Y243 479 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 SAMD9LQ8IVG5 1584 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 ZNF609O15014 1411 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 ENO1P06733 434 aaKnown RBP16.56■□□□□ 0.24
OTUD3-201ENST00000375120 HIC1Q14526 733 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 ENGASEQ8NFI3 743 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 FNDC3AQ9Y2H6 1198 aaKnown RBP16.56■□□□□ 0.24
OTUD3-201ENST00000375120 LAMC1P11047 1609 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 STAT3P40763 770 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 YWHAHQ04917 246 aaPredicted RBP16.56■□□□□ 0.24
OTUD3-201ENST00000375120 MDH1BQ5I0G3 518 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 PADI6Q6TGC4 694 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 RHOT1Q8IXI2 618 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 SLC44A5Q8NCS7 719 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 GIPC2Q8TF65 315 aa16.56■□□□□ 0.24
OTUD3-201ENST00000375120 GOLGA8RI6L899 631 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms