RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 MSH2P43246 934 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 MFAP3P55082 362 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 TMEM132BQ14DG7 1078 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 OR9Q1Q8NGQ5 310 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 ZNF148Q9UQR1 794 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 EPN1Q9Y6I3 576 aaPredicted RBP6.73□□□□□ -1.33
PTPN3-202ENST00000374541 ZNF233A6NK53 670 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 EFCAB14O75071 495 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 SPAG7O75391 227 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 MCF2P10911 925 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 LONP1P36776 959 aaKnown RBP6.73□□□□□ -1.33
PTPN3-202ENST00000374541 PCYT1AP49585 367 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 ARL4DP49703 201 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 ST8SIA6P61647 398 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 IFT88Q13099 833 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 CUL1Q13616 776 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 IQCB1Q15051 598 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 LRRC8AQ8IWT6 810 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 IFNL3Q8IZI9 196 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 ABTB1Q969K4 478 aaPredicted RBP6.73□□□□□ -1.33
PTPN3-202ENST00000374541 LRRC37BQ96QE4 947 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 MTRQ99707 1265 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 DPH5Q9H2P9 285 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 TLE6Q9H808 572 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 THG1LQ9NWX6 298 aaKnown RBP6.73□□□□□ -1.33
PTPN3-202ENST00000374541 NDE1Q9NXR1 346 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 CDHR2Q9BYE9 1310 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 KRT4P19013 534 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 ALDH1A3P47895 512 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 OSTNP61366 133 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 TMED1Q13445 227 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 BSPRYQ5W0U4 402 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 EMBQ6PCB8 327 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 FAM186BQ8IYM0 893 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 POMGNT1Q8WZA1 660 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 POLE3Q9NRF9 147 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 KRT82Q9NSB4 513 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 DAGLAQ9Y4D2 1042 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 PPME1Q9Y570 386 aa6.73□□□□□ -1.33
PTPN3-202ENST00000374541 COL5A2P05997 1499 aaPredicted RBP6.73□□□□□ -1.33
PTPN3-202ENST00000374541 ACADMP11310 421 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 CYP2C9P11712 490 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 PFKFB1P16118 471 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 NFKBIAP25963 317 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 ADORA2AP29274 412 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 HOXA13P31271 388 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 TRAPPC10P48553 1259 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 ADCY2Q08462 1091 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 PTGISQ16647 500 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 ARHGAP44Q17R89 818 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 PRR23CQ6ZRP0 262 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 IFNL1Q8IU54 200 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 ZNF713Q8N859 430 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 RNF139Q8WU17 664 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 GSDMAQ96QA5 445 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 ZSCAN10Q96SZ4 725 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 COLEC11Q9BWP8 271 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.72□□□□□ -1.332e-6■■□□□ 11.7
PTPN3-202ENST00000374541 NLRC4Q9NPP4 1024 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 CLDND1Q9NY35 253 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 STOML1Q9UBI4 398 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 SERTAD1Q9UHV2 236 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 PPP1R12AO14974 1030 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 CYBBP04839 570 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 PGK2P07205 417 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 NT5C2P49902 561 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 BACE1P56817 501 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 GUCY2DQ02846 1103 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 TMCO4Q5TGY1 634 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 NOSTRINQ8IVI9 506 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 NEK9Q8TD19 979 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 SAAL1Q96ER3 474 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 PSMB7Q99436 277 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 hCG_1984214I3L0E3 225 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 CHUKO15111 745 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 MAPK13O15264 365 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 CPP00450 1065 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 KRT8P05787 483 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 ARHGDIAP52565 204 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 PTK2Q05397 1052 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 TMEM62Q0P6H9 643 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 GLE1Q53GS7 698 aaKnown RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 NELFCDQ8IXH7 590 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 CACTINQ8WUQ7 758 aaKnown RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 DHX38Q92620 1227 aaKnown RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 TMEM60Q9H2L4 133 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 AKAP7Q9P0M2 348 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 CPSF3Q9UKF6 684 aaKnown RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 TLK1Q9UKI8 766 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 ABCB11O95342 1321 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 KDM6AO15550 1401 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 DLC1Q96QB1 1528 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 SHPRHQ149N8 1683 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 IQANK1A0A1B0GTG1 560 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 SNAP23O00161 211 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 GAP43P17677 238 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 PPARGP37231 505 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 VPS41P49754 854 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 ERVK-9P63128 1117 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 ERVK-24P63145 666 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms