RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 RASAL2Q9UJF2 1139 aa19.43■□□□□ 0.7
PHF1-201ENST00000374512 SMCHD1A6NHR9 2005 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 PSME4Q14997 1843 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 KRT71Q3SY84 523 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 LRCH2Q5VUJ6 765 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 FBXW10Q5XX13 1052 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 FAM178BQ8IXR5 827 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 SPICE1Q8N0Z3 855 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 ATP8B4Q8TF62 1192 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 TLCD1Q96CP7 247 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 FIZ1Q96SL8 496 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 ARHGEF10LQ9HCE6 1279 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 BCCIPQ9P287 314 aaKnown RBP eCLIP19.42■□□□□ 0.7
PHF1-201ENST00000374512 HERC5Q9UII4 1024 aaKnown RBP19.42■□□□□ 0.7
PHF1-201ENST00000374512 NOVA2Q9UNW9 492 aaKnown RBP19.42■□□□□ 0.7
PHF1-201ENST00000374512 LOXHD1Q8IVV2 1947 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 SYNGAP1Q96PV0 1343 aa19.42■□□□□ 0.7
PHF1-201ENST00000374512 BCRP11274 1271 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 PRELPP51888 382 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 SMTNP53814 917 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 MYL7Q01449 175 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 IFFO1Q0D2I5 559 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 IFT88Q13099 833 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 BYSLQ13895 437 aaKnown RBP19.41■□□□□ 0.7
PHF1-201ENST00000374512 RRP1BQ14684 758 aaKnown RBP19.41■□□□□ 0.7
PHF1-201ENST00000374512 PTPROQ16827 1216 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 RNF187Q5TA31 235 aaPredicted RBP19.41■□□□□ 0.7
PHF1-201ENST00000374512 C11orf63Q6NUN7 778 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 CCDC121Q6ZUS5 278 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 TAX1BP1Q86VP1 789 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 TPH2Q8IWU9 490 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 PIGOQ8TEQ8 1089 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 PRMT6Q96LA8 375 aaPredicted RBP19.41■□□□□ 0.7
PHF1-201ENST00000374512 CELF4Q9BZC1 486 aaKnown RBP19.41■□□□□ 0.7
PHF1-201ENST00000374512 SFI1A8K8P3 1242 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 PPIP5K2O43314 1243 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 GGPS1O95749 300 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 CTTNQ14247 550 aaKnown RBP19.41■□□□□ 0.7
PHF1-201ENST00000374512 DCAF12L1Q5VU92 463 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 MORC4Q8TE76 937 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 DYDC2Q96IM9 177 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 WDR11Q9BZH6 1224 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 EHMT1Q9H9B1 1298 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.41■□□□□ 0.7
PHF1-201ENST00000374512 POLD4Q9HCU8 107 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 ZDHHC18Q9NUE0 388 aa19.41■□□□□ 0.7
PHF1-201ENST00000374512 P4HA2O15460 535 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 MAGOHP61326 146 aaKnown RBP19.4■□□□□ 0.7
PHF1-201ENST00000374512 ZC2HC1CQ53FD0 456 aaPredicted RBP19.4■□□□□ 0.7
PHF1-201ENST00000374512 KCNV1Q6PIU1 500 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 UBL4BQ8N7F7 174 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 MAGOHBQ96A72 148 aaKnown RBP19.4■□□□□ 0.7
PHF1-201ENST00000374512 PGM2Q96G03 612 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 DPH5Q9H2P9 285 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 PABPC3Q9H361 631 aaKnown RBP19.4■□□□□ 0.7
PHF1-201ENST00000374512 STK32BQ9NY57 414 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 PARP2Q9UGN5 583 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 DDX20Q9UHI6 824 aaKnown RBP19.4■□□□□ 0.7
PHF1-201ENST00000374512 GOLGA6L7A0A1B0GV03 622 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 YDJCA8MPS7 323 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 PODXLO00592 558 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 CHRNA3P32297 505 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 CETN1Q12798 172 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 BFSP1Q12934 665 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 CBWD6Q4V339 395 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 CBWD3Q5JTY5 395 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 CBWD5Q5RIA9 395 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 AGPAT1Q99943 283 aa19.4■□□□□ 0.7
PHF1-201ENST00000374512 A1CFQ9NQ94 594 aaKnown RBP19.4■□□□□ 0.7
PHF1-201ENST00000374512 CCDC169A6NNP5 214 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 CFBP00751 764 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 ABCB4P21439 1286 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 MAPK7Q13164 816 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 ALCAMQ13740 583 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 KIAA1755Q5JYT7 1200 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 RAPGEF5Q92565 580 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 RPS6KC1Q96S38 1066 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 STRA6Q9BX79 667 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 GOPCQ9HD26 462 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 TMOD2Q9NZR1 351 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 CNOT7Q9UIV1 285 aaKnown RBP19.39■□□□□ 0.69
PHF1-201ENST00000374512 VCAM1P19320 739 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 ECE1P42892 770 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 PRPF4BQ13523 1007 aaKnown RBP19.39■□□□□ 0.69
PHF1-201ENST00000374512 GRIPAP1Q4V328 841 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 ODR4Q5SWX8 454 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 GKAP1Q5VSY0 366 aaPredicted RBP19.39■□□□□ 0.69
PHF1-201ENST00000374512 CACNA2D3Q8IZS8 1091 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 NEK9Q8TD19 979 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 TATDN2Q93075 761 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 RUNDC3BQ96NL0 473 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 WDR18Q9BV38 432 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 FAM129AQ9BZQ8 928 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 THAP2Q9H0W7 228 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 BCAS3Q9H6U6 928 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 CNOT8Q9UFF9 292 aaKnown RBP19.39■□□□□ 0.69
PHF1-201ENST00000374512 ATP8A1Q9Y2Q0 1164 aa19.39■□□□□ 0.69
PHF1-201ENST00000374512 IGSF9BQ9UPX0 1349 aa19.38■□□□□ 0.69
PHF1-201ENST00000374512 GAS7O60861 476 aa19.38■□□□□ 0.69
PHF1-201ENST00000374512 PHF2O75151 1096 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms