RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 INTS2Q9H0H0 1204 aaKnown RBP11.71□□□□□ -0.53
CXCL12-203ENST00000374429 DOCK2Q92608 1830 aa11.71□□□□□ -0.53
CXCL12-203ENST00000374429 MXI1P50539 228 aa11.71□□□□□ -0.54
CXCL12-203ENST00000374429 SLC18A3Q16572 532 aa11.71□□□□□ -0.54
CXCL12-203ENST00000374429 BEND6Q5SZJ8 279 aaPredicted RBP11.71□□□□□ -0.54
CXCL12-203ENST00000374429 HGSNATQ68CP4 663 aa11.71□□□□□ -0.54
CXCL12-203ENST00000374429 SULF1Q8IWU6 871 aa11.71□□□□□ -0.54
CXCL12-203ENST00000374429 PDCD2LQ9BRP1 358 aa11.71□□□□□ -0.54
CXCL12-203ENST00000374429 HSPBP1Q9NZL4 362 aa11.71□□□□□ -0.54
CXCL12-203ENST00000374429 SCN9AQ15858 1988 aa11.71□□□□□ -0.54
CXCL12-203ENST00000374429 LAMB2P55268 1798 aa11.71□□□□□ -0.54
CXCL12-203ENST00000374429 MYH15Q9Y2K3 1946 aa11.71□□□□□ -0.54
CXCL12-203ENST00000374429 GOLGA6BA6NDN3 693 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 VWA5AO00534 786 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 NOP56O00567 594 aaKnown RBP11.7□□□□□ -0.54
CXCL12-203ENST00000374429 GNA14O95837 355 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 FGGP02679 453 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 FTLP02792 175 aaPredicted RBP11.7□□□□□ -0.54
CXCL12-203ENST00000374429 GLI1P08151 1106 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 FAM153BP0C7A2 387 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 RARRES1P49788 294 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 LIG4P49917 911 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 TMEM62Q0P6H9 643 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 PGM5Q15124 567 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 EPHA7Q15375 998 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 FAM153CQ494X1 144 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 Q4G0T1 1027 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 TMEM63BQ5T3F8 832 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 ACSF2Q96CM8 615 aaPredicted RBP11.7□□□□□ -0.54
CXCL12-203ENST00000374429 TSGA10Q9BZW7 698 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 FAM153AQ9UHL3 310 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 NAGPAQ9UK23 515 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 PCDHA2Q9Y5H9 948 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 PDXKO00764 312 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 BUB1BO60566 1050 aaPredicted RBP11.7□□□□□ -0.54
CXCL12-203ENST00000374429 RNF40O75150 1001 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 KCNJ1P48048 391 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 VAMP7P51809 220 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 USP14P54578 494 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 LY6KQ17RY6 165 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 TREML2Q5T2D2 321 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 RPUSD2Q8IZ73 545 aaKnown RBP11.7□□□□□ -0.54
CXCL12-203ENST00000374429 CPA5Q8WXQ8 436 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 DDX60LQ5H9U9 1706 aaKnown RBP11.7□□□□□ -0.54
CXCL12-203ENST00000374429 TIAM2Q8IVF5 1701 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 SGPL1O95470 568 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 TMOD1P28289 359 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 ZCWPW2Q504Y3 356 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 SYCP2LQ5T4T6 812 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 KAZNQ674X7 775 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 PHLDB3Q6NSJ2 640 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 SLC47A2Q86VL8 602 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 MCF2L2Q86YR7 1114 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 TATDN2Q93075 761 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 TRIM51Q9BSJ1 452 aa11.7□□□□□ -0.54
CXCL12-203ENST00000374429 CNGA1P29973 690 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 CYP2C19P33261 490 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 SLCO1A2P46721 670 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 BACE1P56817 501 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 TMEM132BQ14DG7 1078 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 MEA1Q16626 185 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 CREG2Q8IUH2 290 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 DAW1Q8N136 415 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 CEP120Q8N960 986 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 SLC35G2Q8TBE7 412 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 COPS5Q92905 334 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 ARHGEF26Q96DR7 871 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 CEP63Q96MT8 703 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 GMLQ99445 158 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 NXF1Q9UBU9 619 aaKnown RBP11.69□□□□□ -0.54
CXCL12-203ENST00000374429 CD2APQ9Y5K6 639 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 CSADQ9Y600 493 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 ZNF536O15090 1300 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 CALRP27797 417 aaKnown RBP11.69□□□□□ -0.54
CXCL12-203ENST00000374429 FOXR1Q6PIV2 292 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 LEKR1Q6ZMV7 388 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 CCDC60Q8IWA6 550 aaPredicted RBP11.69□□□□□ -0.54
CXCL12-203ENST00000374429 TAS1R2Q8TE23 839 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 HAUS1Q96CS2 278 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 TARS2Q9BW92 718 aaKnown RBP11.69□□□□□ -0.54
CXCL12-203ENST00000374429 RANBP17Q9H2T7 1088 aaKnown RBP11.69□□□□□ -0.54
CXCL12-203ENST00000374429 PPP1R9AQ9ULJ8 1098 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 SH3BP1Q9Y3L3 701 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 ECM29Q5VYK3 1845 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 COL22A1Q8NFW1 1626 aaPredicted RBP11.69□□□□□ -0.54
CXCL12-203ENST00000374429 MYO3BQ8WXR4 1341 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 CYP3A7-CYP3A51PA0A087WV96 503 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 INO80B-WBP1J3KQ70 363 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 DDX3XO00571 662 aaKnown RBP eCLIP11.69□□□□□ -0.54
CXCL12-203ENST00000374429 BFSP1Q12934 665 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 TXLNBQ8N3L3 684 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 XXYLT1Q8NBI6 393 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 AGBL3Q8NEM8 1001 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 INO80BQ9C086 356 aaPredicted RBP11.69□□□□□ -0.54
CXCL12-203ENST00000374429 AGO4Q9HCK5 861 aaKnown RBP11.69□□□□□ -0.54
CXCL12-203ENST00000374429 TRPC6Q9Y210 931 aa11.69□□□□□ -0.54
CXCL12-203ENST00000374429 SCN7AQ01118 1682 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 GRID2IPA4D2P6 1211 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 PTPRAP18433 802 aa11.68□□□□□ -0.54
CXCL12-203ENST00000374429 NPTX2P47972 431 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms