RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 RPUSD2Q8IZ73 545 aaKnown RBP8.41□□□□□ -1.06
HERC4-202ENST00000373700 HDAC7Q8WUI4 952 aa8.41□□□□□ -1.06
HERC4-202ENST00000373700 SCFD1Q8WVM8 642 aa8.41□□□□□ -1.06
HERC4-202ENST00000373700 DNAJC7Q99615 494 aa8.41□□□□□ -1.06
HERC4-202ENST00000373700 IQCGQ9H095 443 aaKnown RBP8.41□□□□□ -1.06
HERC4-202ENST00000373700 INTS2Q9H0H0 1204 aaKnown RBP8.41□□□□□ -1.06
HERC4-202ENST00000373700 TMEM206Q9H813 350 aa8.41□□□□□ -1.06
HERC4-202ENST00000373700 JPH1Q9HDC5 661 aaPredicted RBP8.41□□□□□ -1.06
HERC4-202ENST00000373700 TBC1D22BQ9NU19 505 aa8.41□□□□□ -1.06
HERC4-202ENST00000373700 NUP98P52948 1817 aa8.41□□□□□ -1.06
HERC4-202ENST00000373700 ZSCAN5CA6NGD5 496 aaPredicted RBP8.4□□□□□ -1.06
HERC4-202ENST00000373700 H3BQF6 201 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 CYP26A1O43174 497 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 THAP12O43422 761 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 ACSL3O95573 720 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 ICAM1P05362 532 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 VAMP7P51809 220 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 ZKSCAN8Q15776 578 aaPredicted RBP8.4□□□□□ -1.06
HERC4-202ENST00000373700 ECM1Q16610 540 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 CCNI2Q6ZMN8 369 aaPredicted RBP8.4□□□□□ -1.06
HERC4-202ENST00000373700 PSMD1Q99460 953 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 MAK16Q9BXY0 300 aaKnown RBP8.4□□□□□ -1.06
HERC4-202ENST00000373700 MLXIPLQ9NP71 852 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 RCCD1A6NED2 376 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 LRRIQ3A6PVS8 624 aaPredicted RBP8.4□□□□□ -1.06
HERC4-202ENST00000373700 TISP43B9A030 160 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 PDXKO00764 312 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 KLRC4O43908 158 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 CSPG5O95196 566 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 SREBF1P36956 1147 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 DR1Q01658 176 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 MTMR3Q13615 1198 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 C2CD6Q53TS8 623 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 SGO2Q562F6 1265 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 BEND6Q5SZJ8 279 aaPredicted RBP8.4□□□□□ -1.06
HERC4-202ENST00000373700 BSPRYQ5W0U4 402 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 RINT1Q6NUQ1 792 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 IRF2BP1Q8IU81 584 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 PPP1R14CQ8TAE6 165 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 TNFRSF25Q93038 417 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 FAM84AQ96KN4 292 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 FMO2Q99518 471 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 ANKZF1Q9H8Y5 726 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 SLC9A2Q9UBY0 812 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 CD2APQ9Y5K6 639 aa8.4□□□□□ -1.06
HERC4-202ENST00000373700 SART1O43290 800 aaKnown RBP8.4□□□□□ -1.07
HERC4-202ENST00000373700 AKAP3O75969 853 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 NR1D1P20393 614 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 SMARCA1P28370 1054 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 PSMC5P62195 406 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 ORC2Q13416 577 aaPredicted RBP8.4□□□□□ -1.07
HERC4-202ENST00000373700 TKFCQ3LXA3 575 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 BRDTQ58F21 947 aaPredicted RBP8.4□□□□□ -1.07
HERC4-202ENST00000373700 PPP1R21Q6ZMI0 780 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 RNF10Q8N5U6 811 aaKnown RBP8.4□□□□□ -1.07
HERC4-202ENST00000373700 CCDC63Q8NA47 563 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 GIMAP7Q8NHV1 300 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 SYTL5Q8TDW5 730 aaPredicted RBP8.4□□□□□ -1.07
HERC4-202ENST00000373700 NLRP7Q8WX94 980 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 MTMR8Q96EF0 704 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 CDHR1Q96JP9 859 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 CLMNQ96JQ2 1002 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 SPATA33Q96N06 139 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 MSTO1Q9BUK6 570 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 ADAM33Q9BZ11 813 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 CELF4Q9BZC1 486 aaKnown RBP8.4□□□□□ -1.07
HERC4-202ENST00000373700 NSRP1Q9H0G5 558 aaKnown RBP8.4□□□□□ -1.07
HERC4-202ENST00000373700 STMN4Q9H169 189 aaPredicted RBP8.4□□□□□ -1.07
HERC4-202ENST00000373700 ZNF302Q9NR11 478 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 PPP1R9AQ9ULJ8 1098 aa8.4□□□□□ -1.07
HERC4-202ENST00000373700 POC1B-GALNT4F8VUJ3 575 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 TXNP10599 105 aaKnown RBP8.39□□□□□ -1.07
HERC4-202ENST00000373700 CASP5P51878 434 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 GTF2A1P52655 376 aaPredicted RBP8.39□□□□□ -1.07
HERC4-202ENST00000373700 KRT76Q01546 638 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 NFX1Q12986 1120 aaKnown RBP8.39□□□□□ -1.07
HERC4-202ENST00000373700 FAM160B1Q5W0V3 765 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 EMBQ6PCB8 327 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 INTS8Q75QN2 995 aaKnown RBP8.39□□□□□ -1.07
HERC4-202ENST00000373700 FAM83AQ86UY5 434 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 TMEM139Q8IV31 216 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 PLCD3Q8N3E9 789 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 PBKQ96KB5 322 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 POLR3FQ9H1D9 316 aaPredicted RBP8.39□□□□□ -1.07
HERC4-202ENST00000373700 BCAS3Q9H6U6 928 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 PLCB1Q9NQ66 1216 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 ANAPC7Q9UJX3 599 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 NOC2LQ9Y3T9 749 aaKnown RBP8.39□□□□□ -1.07
HERC4-202ENST00000373700 CYP2C8P10632 490 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 RPS12P25398 132 aaKnown RBP8.39□□□□□ -1.07
HERC4-202ENST00000373700 CCNA1P78396 465 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 LACTBP83111 547 aaPredicted RBP8.39□□□□□ -1.07
HERC4-202ENST00000373700 GUCY1A3Q02108 690 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 PPP2R5DQ14738 602 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 FRMD5Q7Z6J6 570 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 TRIM50Q86XT4 487 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 FAM118BQ9BPY3 351 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 TRIM51Q9BSJ1 452 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 PI4K2AQ9BTU6 479 aa8.39□□□□□ -1.07
HERC4-202ENST00000373700 CNOT8Q9UFF9 292 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms