RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 BIN1O00499 593 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 STX10O60499 249 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 PNMA6AP0CW24 399 aaPredicted RBP22.54■■□□□ 1.2
SYNC-201ENST00000373484 TMOD1P28289 359 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 RFC5P40937 340 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 CLCN3P51790 818 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 MRPS6P82932 125 aaKnown RBP22.54■■□□□ 1.2
SYNC-201ENST00000373484 MGAT3Q09327 533 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 MBTPS1Q14703 1052 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 GPNMBQ14956 572 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 SHC4Q6S5L8 630 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 CABP7Q86V35 215 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 EXOC8Q8IYI6 725 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 TRIML1Q8N9V2 468 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 MNS1Q8NEH6 495 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 VWCEQ96DN2 955 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 CLIC6Q96NY7 704 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 JPH2Q9BR39 696 aaPredicted RBP22.54■■□□□ 1.2
SYNC-201ENST00000373484 PRO3102Q9H379 93 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 IL23AQ9NPF7 189 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 RANBP2P49792 3224 aaKnown RBP22.54■■□□□ 1.2
SYNC-201ENST00000373484 SLC26A4O43511 780 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 CHRNA1P02708 482 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 UBA7P41226 1012 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 EPHB4P54760 987 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 CHRDL2Q6WN34 429 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 KRBA2Q6ZNG9 492 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 SLC7A3Q8WY07 619 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 SUGCTQ9HAC7 445 aa22.54■■□□□ 1.2
SYNC-201ENST00000373484 POLGP54098 1239 aaPredicted RBP22.53■■□□□ 1.2
SYNC-201ENST00000373484 MKRN4PQ13434 485 aaPredicted RBP22.53■■□□□ 1.2
SYNC-201ENST00000373484 NT5DC1Q5TFE4 455 aa22.53■■□□□ 1.2
SYNC-201ENST00000373484 IER5Q5VY09 327 aa22.53■■□□□ 1.2
SYNC-201ENST00000373484 MLKLQ8NB16 471 aa22.53■■□□□ 1.2
SYNC-201ENST00000373484 CCDC43Q96MW1 224 aaKnown RBP22.53■■□□□ 1.2
SYNC-201ENST00000373484 PNMA5Q96PV4 448 aa22.53■■□□□ 1.2
SYNC-201ENST00000373484 UBE2OQ9C0C9 1292 aaKnown RBP22.53■■□□□ 1.2
SYNC-201ENST00000373484 NT5C3AQ9H0P0 336 aa22.53■■□□□ 1.2
SYNC-201ENST00000373484 CDY2AQ9Y6F7 541 aa22.53■■□□□ 1.2
SYNC-201ENST00000373484 NBNO60934 754 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 TUBB4BP68371 445 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 TMEM62Q0P6H9 643 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 GRB10Q13322 594 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 C16orf59Q7L2K0 433 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 RPUSD2Q8IZ73 545 aaKnown RBP22.52■■□□□ 1.2
SYNC-201ENST00000373484 KCTD17Q8N5Z5 321 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 CCSER1Q9C0I3 900 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 M0QZ92 97 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 DGAT1O75907 488 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 CXCL10P02778 98 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 PFKMP08237 780 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 ATP1A3P13637 1013 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 DRP2Q13474 957 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 EMC2Q15006 297 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 SPECC1Q5M775 1068 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 TEX35Q5T0J7 233 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 DEFB128Q7Z7B8 93 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 TMEM139Q8IV31 216 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 GPR161Q8N6U8 529 aaKnown RBP22.52■■□□□ 1.2
SYNC-201ENST00000373484 EPSTI1Q96J88 318 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 UBXN6Q9BZV1 441 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 DNM3Q9UQ16 869 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 AKT3Q9Y243 479 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 TRPV2Q9Y5S1 764 aa22.52■■□□□ 1.2
SYNC-201ENST00000373484 E9PMD0 336 aa22.51■■□□□ 1.19
SYNC-201ENST00000373484 GAS2O43903 313 aaKnown RBP22.51■■□□□ 1.19
SYNC-201ENST00000373484 VTNP04004 478 aa22.51■■□□□ 1.19
SYNC-201ENST00000373484 ACRP10323 421 aa22.51■■□□□ 1.19
SYNC-201ENST00000373484 DNM2P50570 870 aa22.51■■□□□ 1.19
SYNC-201ENST00000373484 TMEM119Q4V9L6 283 aa22.51■■□□□ 1.19
SYNC-201ENST00000373484 KANK3Q6NY19 840 aa22.51■■□□□ 1.19
SYNC-201ENST00000373484 USP49Q70CQ1 688 aa22.51■■□□□ 1.19
SYNC-201ENST00000373484 KCNK18Q7Z418 384 aa22.51■■□□□ 1.19
SYNC-201ENST00000373484 ENOX1Q8TC92 643 aaKnown RBP22.51■■□□□ 1.19
SYNC-201ENST00000373484 CALML4Q96GE6 196 aa22.51■■□□□ 1.19
SYNC-201ENST00000373484 CDK5RAP3Q96JB5 506 aa22.51■■□□□ 1.19
SYNC-201ENST00000373484 CELF4Q9BZC1 486 aaKnown RBP22.51■■□□□ 1.19
SYNC-201ENST00000373484 XPNPEP1Q9NQW7 623 aa22.51■■□□□ 1.19
SYNC-201ENST00000373484 MICAL3Q7RTP6 2002 aa22.51■■□□□ 1.19
SYNC-201ENST00000373484 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.5■■□□□ 1.19
SYNC-201ENST00000373484 EYA4O95677 639 aa22.5■■□□□ 1.19
SYNC-201ENST00000373484 TUBB2AQ13885 445 aa22.5■■□□□ 1.19
SYNC-201ENST00000373484 SYMPKQ92797 1274 aaKnown RBP22.5■■□□□ 1.19
SYNC-201ENST00000373484 MTRQ99707 1265 aa22.5■■□□□ 1.19
SYNC-201ENST00000373484 TUBB2BQ9BVA1 445 aa22.5■■□□□ 1.19
SYNC-201ENST00000373484 OSBPL7Q9BZF2 842 aa22.5■■□□□ 1.19
SYNC-201ENST00000373484 BHMT2Q9H2M3 363 aa22.5■■□□□ 1.19
SYNC-201ENST00000373484 ATP6V0A4Q9HBG4 840 aa22.5■■□□□ 1.19
SYNC-201ENST00000373484 BMP2KQ9NSY1 1161 aaPredicted RBP22.5■■□□□ 1.19
SYNC-201ENST00000373484 KCNH3Q9ULD8 1083 aa22.5■■□□□ 1.19
SYNC-201ENST00000373484 PPP2R2CQ9Y2T4 447 aa22.5■■□□□ 1.19
SYNC-201ENST00000373484 ARHGEF35A5YM69 484 aa22.5■■□□□ 1.19
SYNC-201ENST00000373484 TMEM240Q5SV17 173 aa22.5■■□□□ 1.19
SYNC-201ENST00000373484 PSRC1Q6PGN9 363 aaPredicted RBP22.5■■□□□ 1.19
SYNC-201ENST00000373484 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.5■■□□□ 1.19
SYNC-201ENST00000373484 MYH11P35749 1972 aa22.49■■□□□ 1.19
SYNC-201ENST00000373484 GPR32O75388 356 aa22.49■■□□□ 1.19
SYNC-201ENST00000373484 ZNF18P17022 549 aa22.49■■□□□ 1.19
SYNC-201ENST00000373484 KARSQ15046 597 aaKnown RBP22.49■■□□□ 1.19
SYNC-201ENST00000373484 FBXO47Q5MNV8 452 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms