RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 UCHL3P15374 230 aa11.65□□□□□ -0.54
CSMD2-204ENST00000373380 GALCP54803 685 aa11.65□□□□□ -0.54
CSMD2-204ENST00000373380 ERVK-24P63145 666 aa11.65□□□□□ -0.54
CSMD2-204ENST00000373380 ASPHQ12797 758 aa11.65□□□□□ -0.54
CSMD2-204ENST00000373380 ORC2Q13416 577 aaPredicted RBP11.65□□□□□ -0.54
CSMD2-204ENST00000373380 NCAPHQ15003 741 aa11.65□□□□□ -0.54
CSMD2-204ENST00000373380 RAPH1Q70E73 1250 aa11.65□□□□□ -0.54
CSMD2-204ENST00000373380 MCUQ8NE86 351 aa11.65□□□□□ -0.54
CSMD2-204ENST00000373380 FAM81BQ96LP2 452 aa11.65□□□□□ -0.54
CSMD2-204ENST00000373380 TXLNGQ9NUQ3 528 aa11.65□□□□□ -0.54
CSMD2-204ENST00000373380 M0QZ92 97 aa11.65□□□□□ -0.55
CSMD2-204ENST00000373380 ESRRAP11474 423 aaPredicted RBP11.65□□□□□ -0.55
CSMD2-204ENST00000373380 SSTR3P32745 418 aaPredicted RBP11.65□□□□□ -0.55
CSMD2-204ENST00000373380 USP11P51784 963 aa11.65□□□□□ -0.55
CSMD2-204ENST00000373380 TFDP1Q14186 410 aa11.65□□□□□ -0.55
CSMD2-204ENST00000373380 PPP6R3Q5H9R7 873 aaPredicted RBP11.65□□□□□ -0.55
CSMD2-204ENST00000373380 PCGF5Q86SE9 256 aa11.65□□□□□ -0.55
CSMD2-204ENST00000373380 CCDC117Q8IWD4 279 aaPredicted RBP11.65□□□□□ -0.55
CSMD2-204ENST00000373380 MAML1Q92585 1016 aa11.65□□□□□ -0.55
CSMD2-204ENST00000373380 HVCN1Q96D96 273 aa11.65□□□□□ -0.55
CSMD2-204ENST00000373380 GGT7Q9UJ14 662 aa11.65□□□□□ -0.55
CSMD2-204ENST00000373380 GRID2IPA4D2P6 1211 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 RASA1P20936 1047 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 PSMA2P25787 234 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 KLRC1P26715 233 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 CCND2P30279 289 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 ECE1P42892 770 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 ZNF543Q08ER8 600 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 Q3C1V9 767 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 PDZD4Q76G19 769 aaPredicted RBP11.64□□□□□ -0.55
CSMD2-204ENST00000373380 PODNQ7Z5L7 613 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 CFAP36Q96G28 342 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 TRIM51Q9BSJ1 452 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 IFT122Q9HBG6 1241 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 LRRC37A3O60309 1634 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 SSU72P8A0A1W2PR75 194 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 STXBP3O00186 592 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 TLR3O15455 904 aaKnown RBP11.64□□□□□ -0.55
CSMD2-204ENST00000373380 PRPSAP2O60256 369 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 CAMTA2O94983 1202 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 ZNF18P17022 549 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 SOX5P35711 763 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 QARSP47897 775 aaKnown RBP11.64□□□□□ -0.55
CSMD2-204ENST00000373380 CASP7P55210 303 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 SF3B3Q15393 1217 aaKnown RBP11.64□□□□□ -0.55
CSMD2-204ENST00000373380 SBK1Q52WX2 424 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 MAP3K21Q5TCX8 1036 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 PPP1R18Q6NYC8 613 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 SULF1Q8IWU6 871 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 HSPH1Q92598 858 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 HEXIM2Q96MH2 286 aaKnown RBP11.64□□□□□ -0.55
CSMD2-204ENST00000373380 MAP3K14Q99558 947 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 VCX3AQ9NNX9 186 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 IRAK4Q9NWZ3 460 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 DCTN4Q9UJW0 460 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.64□□□□□ -0.55
CSMD2-204ENST00000373380 SEMA3FQ13275 785 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 LMBRD2Q68DH5 695 aaPredicted RBP11.64□□□□□ -0.55
CSMD2-204ENST00000373380 PCSK1NQ9UHG2 260 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 BCAP29Q9UHQ4 241 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 HPCAL4Q9UM19 191 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 DIS3Q9Y2L1 958 aaKnown RBP11.64□□□□□ -0.55
CSMD2-204ENST00000373380 NUB1Q9Y5A7 615 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 FHOD1Q9Y613 1164 aa11.64□□□□□ -0.55
CSMD2-204ENST00000373380 PDXKO00764 312 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 MAPK13O15264 365 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 SH3BP5O60239 455 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 FGFR4P22455 802 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 SEC24CP53992 1094 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 SH3BGRP55822 239 aaPredicted RBP11.63□□□□□ -0.55
CSMD2-204ENST00000373380 RNASELQ05823 741 aaKnown RBP11.63□□□□□ -0.55
CSMD2-204ENST00000373380 SPARCL1Q14515 664 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 HAUS6Q7Z4H7 955 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 FRMD5Q7Z6J6 570 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 TSC22D3Q99576 134 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 FUT8Q9BYC5 575 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 SLITRK6Q9H5Y7 841 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 PPP1R9AQ9ULJ8 1098 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 DAGLAQ9Y4D2 1042 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 LTN1O94822 1766 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 WDR64B1ANS9 1081 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 PSMD14O00487 310 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 CLDN3O15551 220 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 CYP26A1O43174 497 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 ZBED1O96006 694 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 P4HBP07237 508 aaKnown RBP11.63□□□□□ -0.55
CSMD2-204ENST00000373380 CHRNA3P32297 505 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 HIPK4Q8NE63 616 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 CCHCR1Q8TD31 782 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 CHMP6Q96FZ7 201 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 MASTLQ96GX5 879 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 LACRTQ9GZZ8 138 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 FLT1P17948 1338 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 EIF4E1BA6NMX2 242 aaKnown RBP11.63□□□□□ -0.55
CSMD2-204ENST00000373380 TJP3O95049 919 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 H2AFXP16104 143 aaPredicted RBP11.63□□□□□ -0.55
CSMD2-204ENST00000373380 KRT39Q6A163 491 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 TMEM35BQ8NCS4 154 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 CCT8L2Q96SF2 557 aa11.63□□□□□ -0.55
CSMD2-204ENST00000373380 REEP2Q9BRK0 252 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms