RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 UVRAGQ9P2Y5 699 aa11.77□□□□□ -0.53
LCN2-202ENST00000372998 AMACRQ9UHK6 382 aa11.77□□□□□ -0.53
LCN2-202ENST00000372998 KCNG1Q9UIX4 513 aa11.77□□□□□ -0.53
LCN2-202ENST00000372998 USP21Q9UK80 565 aa11.77□□□□□ -0.53
LCN2-202ENST00000372998 NOVA2Q9UNW9 492 aaKnown RBP11.77□□□□□ -0.53
LCN2-202ENST00000372998 EXOC7Q9UPT5 735 aa11.77□□□□□ -0.53
LCN2-202ENST00000372998 PASKQ96RG2 1323 aa11.77□□□□□ -0.53
LCN2-202ENST00000372998 IGLV3-22A0A075B6J6 115 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 ZSCAN5CA6NGD5 496 aaPredicted RBP11.76□□□□□ -0.53
LCN2-202ENST00000372998 FAM86B1E9PN63 330 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 MEIS1O00470 390 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 RIMBP2O15034 1052 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 TTI1O43156 1089 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 EXOC3O60645 756 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 NDUFB10O96000 172 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 FAM86B2P0C5J1 330 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 SCP2P22307 547 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 CTNNA2P26232 953 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 SLC8A1P32418 973 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 STAT2P52630 851 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 MCCD1P59942 119 aaPredicted RBP11.76□□□□□ -0.53
LCN2-202ENST00000372998 RNASE9P60153 205 aaKnown RBP11.76□□□□□ -0.53
LCN2-202ENST00000372998 PSMC6P62333 389 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 UAP1Q16222 522 aaPredicted RBP11.76□□□□□ -0.53
LCN2-202ENST00000372998 GRIPAP1Q4V328 841 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 ENOSF1Q7L5Y1 443 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 TPH2Q8IWU9 490 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 CCDC197Q8NCU1 140 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 BBOF1Q8ND07 529 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 LNX1Q8TBB1 728 aaPredicted RBP11.76□□□□□ -0.53
LCN2-202ENST00000372998 GRK7Q8WTQ7 553 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 KIFAP3Q92845 792 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 GJA10Q969M2 543 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 TRIM11Q96F44 468 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 CHMP6Q96FZ7 201 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 CCDC114Q96M63 670 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 RUSC1Q9BVN2 902 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 PPANQ9NQ55 473 aaKnown RBP11.76□□□□□ -0.53
LCN2-202ENST00000372998 TMOD2Q9NZR1 351 aa11.76□□□□□ -0.53
LCN2-202ENST00000372998 DBR1Q9UK59 544 aaKnown RBP11.76□□□□□ -0.53
LCN2-202ENST00000372998 SLX4Q8IY92 1834 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 ANKRD31Q8N7Z5 1873 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 CFAP73A6NFT4 308 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 F8W031 263 aaPredicted RBP11.75□□□□□ -0.53
LCN2-202ENST00000372998 CLIC2O15247 247 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 RGS16O15492 202 aaPredicted RBP11.75□□□□□ -0.53
LCN2-202ENST00000372998 RAD21O60216 631 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 DNAJC8O75937 253 aaPredicted RBP11.75□□□□□ -0.53
LCN2-202ENST00000372998 SLITRK3O94933 977 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 CASP4P49662 377 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 MFAP3P55082 362 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 MRPS25P82663 173 aaKnown RBP11.75□□□□□ -0.53
LCN2-202ENST00000372998 CALCOCO2Q13137 446 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 PRPF4BQ13523 1007 aaKnown RBP11.75□□□□□ -0.53
LCN2-202ENST00000372998 CYP1B1Q16678 543 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 CEP55Q53EZ4 464 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 ODR4Q5SWX8 454 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 CC2D2BQ6DHV5 1058 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 JAMLQ86YT9 394 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 GLYCTKQ8IVS8 523 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 CERS5Q8N5B7 392 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 GBP7Q8N8V2 638 aaPredicted RBP11.75□□□□□ -0.53
LCN2-202ENST00000372998 SUPT20HQ8NEM7 779 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 DHX38Q92620 1227 aaKnown RBP11.75□□□□□ -0.53
LCN2-202ENST00000372998 SLCO2A1Q92959 643 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 TATDN2Q93075 761 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 MASTLQ96GX5 879 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 DYDC2Q96IM9 177 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 SEC16BQ96JE7 1060 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 ZFP91Q96JP5 570 aaPredicted RBP11.75□□□□□ -0.53
LCN2-202ENST00000372998 XPO6Q96QU8 1125 aaKnown RBP11.75□□□□□ -0.53
LCN2-202ENST00000372998 HINFPQ9BQA5 517 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 FOXP3Q9BZS1 431 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 GEMIN8Q9NWZ8 242 aaKnown RBP11.75□□□□□ -0.53
LCN2-202ENST00000372998 SAMD15Q9P1V8 674 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 TCEAL9Q9UHQ7 104 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 ZMYM2Q9UBW7 1377 aa11.75□□□□□ -0.53
LCN2-202ENST00000372998 A0A1B0GUA9 196 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 ONECUT3O60422 494 aaPredicted RBP11.74□□□□□ -0.53
LCN2-202ENST00000372998 DKC1O60832 514 aaKnown RBP eCLIP11.74□□□□□ -0.53
LCN2-202ENST00000372998 LYPLA2O95372 231 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 VIL1P09327 827 aaKnown RBP11.74□□□□□ -0.53
LCN2-202ENST00000372998 RARGP13631 454 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 GTF2H1P32780 548 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 VAMP7P51809 220 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 MAGOHP61326 146 aaKnown RBP11.74□□□□□ -0.53
LCN2-202ENST00000372998 CYP4A11Q02928 519 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 IFT88Q13099 833 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 RASA3Q14644 834 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 SKIDA1Q1XH10 827 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 ERMARDQ5T6L9 678 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 TTC19Q6DKK2 380 aaPredicted RBP11.74□□□□□ -0.53
LCN2-202ENST00000372998 MFSD5Q6N075 450 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 C12orf50Q8NA57 414 aaPredicted RBP11.74□□□□□ -0.53
LCN2-202ENST00000372998 CCHCR1Q8TD31 782 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 RAPGEF5Q92565 580 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 MAGOHBQ96A72 148 aaKnown RBP11.74□□□□□ -0.53
LCN2-202ENST00000372998 MYCBPQ99417 103 aaPredicted RBP11.74□□□□□ -0.53
LCN2-202ENST00000372998 ZSWIM1Q9BR11 485 aa11.74□□□□□ -0.53
LCN2-202ENST00000372998 ZNF577Q9BSK1 485 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms