RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 AP3M2P53677 418 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 AP2B1P63010 937 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 KYAT1Q16773 422 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 RGS9BPQ6ZS82 235 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 TTC30AQ86WT1 665 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 PASD1Q8IV76 773 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 OTUB1Q96FW1 271 aaPredicted RBP12.27□□□□□ -0.45
VCL-202ENST00000372755 EPAS1Q99814 870 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 C11orf70Q9BRQ4 267 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 SMYD3Q9H7B4 428 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 ZC4H2Q9NQZ6 224 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 ABCA5Q8WWZ7 1642 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 RNF103-CHMP3A0A140T963 221 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 KRT4P19013 534 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 RAD51Q06609 339 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 FAM83BQ5T0W9 1011 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 TRIM72Q6ZMU5 477 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 ENOSF1Q7L5Y1 443 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 SEL1LQ9UBV2 794 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 RAP1GDS1P52306 607 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 POU5F1BQ06416 359 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 NBPF10Q6P3W6 841 aaKnown RBP12.26□□□□□ -0.45
VCL-202ENST00000372755 BFARQ9NZS9 450 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 CHUKO15111 745 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 ARHGEF9O43307 516 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 OCM2P0CE71 109 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 OCMP0CE72 109 aaPredicted RBP12.26□□□□□ -0.45
VCL-202ENST00000372755 COASYQ13057 564 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 TMCO5AQ8N6Q1 288 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 CEP70Q8NHQ1 597 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 SH3KBP1Q96B97 665 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 RMDN2Q96LZ7 410 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.26□□□□□ -0.45
VCL-202ENST00000372755 FAM187AA6NFU0 413 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 USP17L5A8MUK1 530 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 GGPS1O95749 300 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 KCNA4P22459 653 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 VAMP7P51809 220 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 ARFIP2P53365 341 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 RCAN1P53805 252 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 TAP1Q03518 808 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 TTLL4Q14679 1199 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 FAM47EQ6ZV65 393 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 EFHBQ8N7U6 833 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 AFG1LQ8WV93 481 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 STRBPQ96SI9 672 aaKnown RBP12.26□□□□□ -0.45
VCL-202ENST00000372755 INTS2Q9H0H0 1204 aaKnown RBP12.26□□□□□ -0.45
VCL-202ENST00000372755 WNT8AQ9H1J5 351 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 SARS2Q9NP81 518 aaKnown RBP12.26□□□□□ -0.45
VCL-202ENST00000372755 ATP7BP35670 1465 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 ZNF197O14709 1029 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 SLC16A4O15374 487 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 KITP10721 976 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 CRKP46108 304 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 PSMC1P62191 440 aaKnown RBP12.26□□□□□ -0.45
VCL-202ENST00000372755 ACBD5Q5T8D3 534 aaPredicted RBP12.26□□□□□ -0.45
VCL-202ENST00000372755 PPM1NQ8N819 430 aa12.26□□□□□ -0.45
VCL-202ENST00000372755 SH3RF3Q8TEJ3 882 aaPredicted RBP12.26□□□□□ -0.45
VCL-202ENST00000372755 PAWRQ96IZ0 340 aaKnown RBP12.26□□□□□ -0.45
VCL-202ENST00000372755 CHGBP05060 677 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 P4HBP07237 508 aaKnown RBP12.25□□□□□ -0.45
VCL-202ENST00000372755 GNA15P30679 374 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 RBBP7Q16576 425 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 KNOP1Q1ED39 458 aaKnown RBP12.25□□□□□ -0.45
VCL-202ENST00000372755 THOC1Q96FV9 657 aaKnown RBP12.25□□□□□ -0.45
VCL-202ENST00000372755 SNF8Q96H20 258 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 DYDC2Q96IM9 177 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 KIF2CQ99661 725 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 BPIFA3Q9BQP9 254 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 EML4Q9HC35 981 aaKnown RBP12.25□□□□□ -0.45
VCL-202ENST00000372755 STK25O00506 426 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 ATP1A3P13637 1013 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 HLA-DPA1P20036 260 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 PRAMEP78395 509 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 KCNH2Q12809 1159 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 NECTIN1Q15223 517 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 RCSD1Q6JBY9 416 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 ANO5Q75V66 913 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 STX19Q8N4C7 294 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 RAB42Q8N4Z0 105 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 WDR19Q8NEZ3 1342 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 KDM4CQ9H3R0 1056 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 CLEC4GQ6UXB4 293 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 CNPY4Q8N129 248 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 AIFM3Q96NN9 605 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 MRPL4Q9BYD3 311 aaKnown RBP12.25□□□□□ -0.45
VCL-202ENST00000372755 CASS4Q9NQ75 786 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 ADA2Q9NZK5 511 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 DNAJC5BQ9UF47 199 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 ARHGAP26Q9UNA1 814 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 PNMA6AP0CW24 399 aaPredicted RBP12.25□□□□□ -0.45
VCL-202ENST00000372755 PPP2R2AP63151 447 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 MAP3K10Q02779 954 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 SNRNP48Q6IEG0 339 aaKnown RBP12.25□□□□□ -0.45
VCL-202ENST00000372755 ANKS3Q6ZW76 656 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 RHOT1Q8IXI2 618 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 ATP11CQ8NB49 1132 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 RNF25Q96BH1 459 aaPredicted RBP12.25□□□□□ -0.45
VCL-202ENST00000372755 ZFYVE16Q7Z3T8 1539 aa12.25□□□□□ -0.45
VCL-202ENST00000372755 CCDC195A0A1B0GUA6 201 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms