RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 LONRF3Q496Y0 759 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 SBK1Q52WX2 424 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 KLHL10Q6JEL2 608 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 IRGCQ6NXR0 463 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 SAPCD2Q86UD0 394 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 PPFIBP1Q86W92 1011 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 LRRC43Q8N309 656 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 CCDC197Q8NCU1 140 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 WDR66Q8TBY9 1149 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 RSPH1Q8WYR4 309 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 PTPRN2Q92932 1015 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 RHBDL2Q9NX52 303 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 ADAM22Q9P0K1 906 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 DLGAP2Q9P1A6 1054 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 GGT7Q9UJ14 662 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 FBXO2Q9UK22 296 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-203ENST00000372232 SH3GLB1Q9Y371 365 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 PCDHB6Q9Y5E3 794 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 V9GY48 417 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-203ENST00000372232 F8W031 263 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-203ENST00000372232 M0R2N6 131 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 NMT2O60551 498 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 SRGAP2O75044 1071 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 CYP2D6P10635 497 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 GSTT1P30711 240 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 PCK1P35558 622 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 PBX1P40424 430 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 SH3BGRP55822 239 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-203ENST00000372232 GRIN1Q05586 938 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 C2orf54Q08AI8 447 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 PNOCQ13519 176 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 SEPT14Q6ZU15 432 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 SLC51AQ86UW1 340 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 DZIP1Q86YF9 867 aaKnown RBP9.56□□□□□ -0.88
ATG4A-203ENST00000372232 ARHGAP18Q8N392 663 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 CCDC43Q96MW1 224 aaKnown RBP9.56□□□□□ -0.88
ATG4A-203ENST00000372232 PHF20Q9BVI0 1012 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 TMBIM4Q9HC24 238 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 NEUROD4Q9HD90 331 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 CABP5Q9NP86 173 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 LRRC4BQ9NT99 713 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 VPS54Q9P1Q0 977 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 LRFN2Q9ULH4 789 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 POLIQ9UNA4 740 aa9.56□□□□□ -0.88
ATG4A-203ENST00000372232 ZBTB24O43167 697 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-203ENST00000372232 PDHA1P08559 390 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 FUT4P22083 530 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 HOXD12P35452 270 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 KCNJ2P63252 427 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 PDE4BQ07343 736 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 FAM47AQ5JRC9 791 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 MEI1Q5TIA1 1274 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 CEP128Q6ZU80 1094 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 TMTC3Q6ZXV5 915 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 ZNF365Q70YC5 407 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 HOOK3Q86VS8 718 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 CNGA4Q8IV77 575 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 FOXP4Q8IVH2 680 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-203ENST00000372232 LSM14AQ8ND56 463 aaKnown RBP9.55□□□□□ -0.88
ATG4A-203ENST00000372232 CAGE1Q8TC20 777 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 RAPGEF5Q92565 580 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 PRCCQ92733 491 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-203ENST00000372232 CAPZA3Q96KX2 299 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 TIPINQ9BVW5 301 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 MCM9Q9NXL9 1143 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 TUBA8Q9NY65 449 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-203ENST00000372232 STIM2Q9P246 746 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 SRPRBQ9Y5M8 271 aaKnown RBP9.55□□□□□ -0.88
ATG4A-203ENST00000372232 hCG_1642624A0A1W2PR95 340 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 ANO9A1A5B4 782 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 ENC1O14682 589 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 ERVK-24P63145 666 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 LSAMPQ13449 338 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 PLEKHG6Q3KR16 790 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 RUFY4Q6ZNE9 571 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 ZNF554Q86TJ5 538 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 CCDC65Q8IXS2 484 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 ANKS4BQ8N8V4 417 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 FAM136AQ96C01 138 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 HAPLN3Q96S86 360 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 LRRC1Q9BTT6 524 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 HAUS4Q9H6D7 363 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 RMND1Q9NWS8 449 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 DAAM1Q9Y4D1 1078 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 XDHP47989 1333 aa9.55□□□□□ -0.88
ATG4A-203ENST00000372232 BAZ2AQ9UIF9 1905 aaKnown RBP9.55□□□□□ -0.88
ATG4A-203ENST00000372232 TNRC6CQ9HCJ0 1690 aaKnown RBP9.54□□□□□ -0.88
ATG4A-203ENST00000372232 XRCC5P13010 732 aaKnown RBP9.54□□□□□ -0.88
ATG4A-203ENST00000372232 STIP1P31948 543 aaKnown RBP9.54□□□□□ -0.88
ATG4A-203ENST00000372232 KRT2P35908 639 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 NCALDP61601 193 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 LACTBP83111 547 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-203ENST00000372232 ATP11AP98196 1134 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 EZH2Q15910 746 aaKnown RBP9.54□□□□□ -0.88
ATG4A-203ENST00000372232 EARS2Q5JPH6 523 aaKnown RBP9.54□□□□□ -0.88
ATG4A-203ENST00000372232 SOGA3Q5TF21 947 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 PTCRAQ6ISU1 281 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-203ENST00000372232 PRR5LQ6MZQ0 368 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 SH3RF1Q7Z6J0 888 aa9.54□□□□□ -0.88
ATG4A-203ENST00000372232 CPLX4Q7Z7G2 160 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms