RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 VPS52Q8N1B4 723 aa16.95■□□□□ 0.3
RPF1-202ENST00000370656 CCDC12Q8WUD4 166 aaPredicted RBP16.95■□□□□ 0.3
RPF1-202ENST00000370656 LIMD1Q9UGP4 676 aa16.95■□□□□ 0.3
RPF1-202ENST00000370656 GOLGA8AA7E2F4 631 aa16.94■□□□□ 0.3
RPF1-202ENST00000370656 GOLGA8BA8MQT2 603 aa16.94■□□□□ 0.3
RPF1-202ENST00000370656 WDR64B1ANS9 1081 aa16.94■□□□□ 0.3
RPF1-202ENST00000370656 ASGR2P07307 311 aa16.94■□□□□ 0.3
RPF1-202ENST00000370656 DARSP14868 501 aaKnown RBP16.94■□□□□ 0.3
RPF1-202ENST00000370656 GJB2P29033 226 aa16.94■□□□□ 0.3
RPF1-202ENST00000370656 POLGP54098 1239 aaPredicted RBP16.94■□□□□ 0.3
RPF1-202ENST00000370656 CDC42EP1Q00587 391 aa16.94■□□□□ 0.3
RPF1-202ENST00000370656 PPFIBP1Q86W92 1011 aa16.94■□□□□ 0.3
RPF1-202ENST00000370656 LRRC71Q8N4P6 559 aa16.94■□□□□ 0.3
RPF1-202ENST00000370656 NSUN7Q8NE18 718 aaKnown RBP16.94■□□□□ 0.3
RPF1-202ENST00000370656 NLRP7Q8WX94 980 aa16.94■□□□□ 0.3
RPF1-202ENST00000370656 NKD2Q969F2 451 aaPredicted RBP16.94■□□□□ 0.3
RPF1-202ENST00000370656 ACSF2Q96CM8 615 aaPredicted RBP16.94■□□□□ 0.3
RPF1-202ENST00000370656 C6orf50Q9HD87 102 aa16.94■□□□□ 0.3
RPF1-202ENST00000370656 CYP26B1Q9NR63 512 aa16.94■□□□□ 0.3
RPF1-202ENST00000370656 IRAK3Q9Y616 596 aa16.94■□□□□ 0.3
RPF1-202ENST00000370656 DENND4AQ7Z401 1863 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 SPDYE4A6NLX3 237 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 NT5C1B-RDH14C9J2C7 533 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 ZC3H11AO75152 810 aaKnown RBP eCLIP16.93■□□□□ 0.3
RPF1-202ENST00000370656 OATP04181 439 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 WEE2P0C1S8 567 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 SKIP12755 728 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 GPC3P51654 580 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 HMGN5P82970 282 aaKnown RBP16.93■□□□□ 0.3
RPF1-202ENST00000370656 TBC1D8BQ0IIM8 1120 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 PRR16Q569H4 304 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 ZNF598Q86UK7 904 aaKnown RBP16.93■□□□□ 0.3
RPF1-202ENST00000370656 CABP7Q86V35 215 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 REXO1Q8N1G1 1221 aaKnown RBP16.93■□□□□ 0.3
RPF1-202ENST00000370656 LINC01465Q8N7H1 131 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 C12orf76Q8N812 135 aaPredicted RBP16.93■□□□□ 0.3
RPF1-202ENST00000370656 CRYGNQ8WXF5 182 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 ZBP1Q9H171 429 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 CHST12Q9NRB3 414 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 FAM217BQ9NTX9 383 aaPredicted RBP16.93■□□□□ 0.3
RPF1-202ENST00000370656 ZNF292O60281 2723 aa16.93■□□□□ 0.3
RPF1-202ENST00000370656 CCDC196A0A1B0GTZ2 297 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 ESYT2A0FGR8 921 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 CTSAP10619 480 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 PDCP20941 246 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 SYT1P21579 422 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 GNA11P29992 359 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 STK3Q13188 491 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 PFKFB3Q16875 520 aaPredicted RBP16.92■□□□□ 0.3
RPF1-202ENST00000370656 OTOP3Q7RTS5 596 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 ERMP1Q7Z2K6 904 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 DDX53Q86TM3 631 aaKnown RBP16.92■□□□□ 0.3
RPF1-202ENST00000370656 FLCNQ8NFG4 579 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 ZNF668Q96K58 619 aaPredicted RBP16.92■□□□□ 0.3
RPF1-202ENST00000370656 GCOM2Q9BZD3 368 aaPredicted RBP16.92■□□□□ 0.3
RPF1-202ENST00000370656 ZMYND12Q9H0C1 365 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 SMOC2Q9H3U7 446 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 DISC1Q9NRI5 854 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 STK39Q9UEW8 545 aa16.92■□□□□ 0.3
RPF1-202ENST00000370656 GVINP1Q7Z2Y8 2422 aa16.91■□□□□ 0.3
RPF1-202ENST00000370656 SFPQP23246 707 aaKnown RBP eCLIP16.91■□□□□ 0.3
RPF1-202ENST00000370656 SFNP31947 248 aa16.91■□□□□ 0.3
RPF1-202ENST00000370656 PRKCEQ02156 737 aa16.91■□□□□ 0.3
RPF1-202ENST00000370656 RNASELQ05823 741 aaKnown RBP16.91■□□□□ 0.3
RPF1-202ENST00000370656 PKP1Q13835 747 aa16.91■□□□□ 0.3
RPF1-202ENST00000370656 NTRK3Q16288 839 aa16.91■□□□□ 0.3
RPF1-202ENST00000370656 GLB1LQ6UWU2 654 aa16.91■□□□□ 0.3
RPF1-202ENST00000370656 FRMD5Q7Z6J6 570 aa16.91■□□□□ 0.3
RPF1-202ENST00000370656 BICD2Q8TD16 824 aa16.91■□□□□ 0.3
RPF1-202ENST00000370656 IGSF21Q96ID5 467 aa16.91■□□□□ 0.3
RPF1-202ENST00000370656 INO80BQ9C086 356 aaPredicted RBP16.91■□□□□ 0.3
RPF1-202ENST00000370656 SFXN1Q9H9B4 322 aa16.91■□□□□ 0.3
RPF1-202ENST00000370656 NAP1L2Q9ULW6 460 aaPredicted RBP16.91■□□□□ 0.3
RPF1-202ENST00000370656 STX6O43752 255 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 EPCAMP16422 314 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 FGFR4P22455 802 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 CIITAP33076 1130 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 PHKA2P46019 1235 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 ID4P47928 161 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 DNM2P50570 870 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 TDGQ13569 410 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 TWF2Q6IBS0 349 aaKnown RBP16.9■□□□□ 0.3
RPF1-202ENST00000370656 TMC5Q6UXY8 1006 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 CCDC149Q6ZUS6 474 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 SLC22A17Q8WUG5 538 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 AUTS2Q8WXX7 1259 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 RTP3Q9BQQ7 232 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 TRAIPQ9BWF2 469 aa16.9■□□□□ 0.3
RPF1-202ENST00000370656 NCOA5Q9HCD5 579 aaKnown RBP16.9■□□□□ 0.3
RPF1-202ENST00000370656 ZNF862O60290 1169 aa16.89■□□□□ 0.29
RPF1-202ENST00000370656 AOC1P19801 751 aa16.89■□□□□ 0.29
RPF1-202ENST00000370656 RAB27AP51159 221 aa16.89■□□□□ 0.29
RPF1-202ENST00000370656 JAK3P52333 1124 aa16.89■□□□□ 0.29
RPF1-202ENST00000370656 CCT2P78371 535 aaKnown RBP16.89■□□□□ 0.29
RPF1-202ENST00000370656 NFKBIBQ15653 356 aa16.89■□□□□ 0.29
RPF1-202ENST00000370656 NOMO2Q5JPE7 1267 aa16.89■□□□□ 0.29
RPF1-202ENST00000370656 GPR149Q86SP6 731 aa16.89■□□□□ 0.29
RPF1-202ENST00000370656 ADSSL1Q8N142 457 aa16.89■□□□□ 0.29
RPF1-202ENST00000370656 RIT2Q99578 217 aa16.89■□□□□ 0.29
RPF1-202ENST00000370656 EMILIN2Q9BXX0 1053 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms