RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 POU3F2P20265 443 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 MC4RP32245 332 aa4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 SAFB2Q14151 953 aaKnown RBP eCLIP4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 OLFML1Q6UWY5 402 aa4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 KRT26Q7Z3Y9 468 aa4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 RD3Q7Z3Z2 195 aa4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 KIF18BQ86Y91 864 aa4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 CHST14Q8NCH0 376 aa4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 PUS7Q96PZ0 661 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 TOR3AQ9H497 397 aa4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 SMURF1Q9HCE7 757 aa4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 PCDH12Q9NPG4 1184 aa4.88□□□□□ -1.63
ECHDC1-201ENST00000368287 PTPDC1A2A3K4 754 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 PROB1E7EW31 1015 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 SCDO00767 359 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 KCNK3O14649 394 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 B3GALT2O43825 422 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 GAS7O60861 476 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 KRT37O76014 449 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 ITGB1P05556 798 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 AOAHP28039 575 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 SCNN1BP51168 640 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 EVA1CP58658 441 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 SMAD3P84022 425 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 MOGSQ13724 837 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 ZNF174Q15697 407 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 ELAVL1Q15717 326 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 GRAMD4Q6IC98 578 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 FSTL4Q6MZW2 842 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 LEO1Q8WVC0 666 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 BOCQ9BWV1 1114 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 SYNPO2LQ9H987 977 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 FZD1Q9UP38 647 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 MAPRE3Q9UPY8 281 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 COX11Q9Y6N1 276 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 XDHP47989 1333 aa4.87□□□□□ -1.63
ECHDC1-201ENST00000368287 PRAMEF25A6NGN4 478 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 ZNF891A8MT65 544 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 H7C1D1 291 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 CBX4O00257 560 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 PPFIA4O75335 1185 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 NCLP19338 710 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 ECE1P42892 770 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 IRF9Q00978 393 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 TMEM132BQ14DG7 1078 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 KANK2Q63ZY3 851 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 LRRC55Q6ZSA7 311 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 LHFPL2Q6ZUX7 228 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 OTOP1Q7RTM1 612 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 NXPE1Q8N323 547 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 CHAC2Q8WUX2 184 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 OR10A5Q9H207 317 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 CAAP1Q9H8G2 361 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 KCNH7Q9NS40 1196 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 B4GALT6Q9UBX8 382 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 TRPS1Q9UHF7 1281 aa4.86□□□□□ -1.63
ECHDC1-201ENST00000368287 CNGA1P29973 690 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 CDKN1CP49918 316 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 MECP2P51608 486 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 HERVK_113P62684 666 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 ATP2C1P98194 919 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 ADAM15Q13444 863 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 CT47A1Q5JQC4 288 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 LRSAM1Q6UWE0 723 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 DDX46Q7L014 1031 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 PASD1Q8IV76 773 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 AFAP1L2Q8N4X5 818 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 OR2W6PQ8NHA6 318 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 PGBD4Q96DM1 585 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 ORAI3Q9BRQ5 295 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 PCIF1Q9H4Z3 704 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 ACSS2Q9NR19 701 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 BTBD7Q9P203 1132 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 B3GALT1Q9Y5Z6 326 aa4.85□□□□□ -1.63
ECHDC1-201ENST00000368287 SPATA31A6Q5VVP1 1343 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 KLRG2A4D1S0 409 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 GOLGA6L6A8MZA4 724 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 PPM1GO15355 546 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 FOXP2O15409 715 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 MPIG6BO95866 241 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 F2P00734 622 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 C4BPAP04003 597 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 CYP17A1P05093 508 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 SOX5P35711 763 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 ID4P47928 161 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 KRTAP10-7P60409 375 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 OCRLQ01968 901 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 STRN3Q13033 797 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 CC2D1AQ6P1N0 951 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 FAM111BQ6SJ93 734 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 DDX42Q86XP3 938 aaKnown RBP eCLIP4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 NOSTRINQ8IVI9 506 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 BEND2Q8NDZ0 799 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 DLG3Q92796 817 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 LPPQ93052 612 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 AMNQ9BXJ7 453 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 R3HDMLQ9H3Y0 253 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 CYP4F11Q9HBI6 524 aa4.84□□□□□ -1.63
ECHDC1-201ENST00000368287 UCKL1Q9NWZ5 548 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms