RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 PPP1R3GB7ZBB8 358 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 CTNND1O60716 968 aaKnown RBP13.2□□□□□ -0.3
PTPRK-203ENST00000368207 CXCL9Q07325 125 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 ARMCX2Q7L311 632 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 PPM1EQ8WY54 764 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 RNF25Q96BH1 459 aaPredicted RBP13.2□□□□□ -0.3
PTPRK-203ENST00000368207 DDX47Q9H0S4 455 aaKnown RBP13.2□□□□□ -0.3
PTPRK-203ENST00000368207 CCDC188H7C350 402 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 MSH4O15457 936 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 OATP04181 439 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 GNA15P30679 374 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 ARHGEF6Q15052 776 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 RAD9BQ6WBX8 426 aa13.2□□□□□ -0.3
PTPRK-203ENST00000368207 ZNF564Q8TBZ8 553 aaPredicted RBP13.2□□□□□ -0.3
PTPRK-203ENST00000368207 CYP26A1O43174 497 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 TROVE2P10155 538 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTPRK-203ENST00000368207 SLC9A1P19634 815 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 SOX5P35711 763 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 CCT5P48643 541 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 KLK7P49862 253 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 RNF10Q8N5U6 811 aaKnown RBP13.19□□□□□ -0.3
PTPRK-203ENST00000368207 DAGLBQ8NCG7 672 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 NUP85Q9BW27 656 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 MIF4GDA9UHW6 222 aaKnown RBP13.19□□□□□ -0.3
PTPRK-203ENST00000368207 PDE1BQ01064 536 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 TNFAIP2Q03169 654 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 ZKSCAN8Q15776 578 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-203ENST00000368207 DNAAF3Q8N9W5 541 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 FAM217BQ9NTX9 383 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-203ENST00000368207 KLHL14Q9P2G3 628 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 ASB14A6NK59 587 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 TAL1P17542 331 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-203ENST00000368207 EARS2Q5JPH6 523 aaKnown RBP13.19□□□□□ -0.3
PTPRK-203ENST00000368207 KCNQ5Q9NR82 932 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 HAUS2Q9NVX0 235 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 TRIM10Q9UDY6 481 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 PCSK1NQ9UHG2 260 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 ACSL3O95573 720 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 RPS12P25398 132 aaKnown RBP13.19□□□□□ -0.3
PTPRK-203ENST00000368207 SEPT1Q8WYJ6 367 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 EDEM3Q9BZQ6 932 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 HPSEQ9Y251 543 aa13.19□□□□□ -0.3
PTPRK-203ENST00000368207 CIB2O75838 187 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 GYPCP04921 128 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 UCHL3P15374 230 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 CIITAP33076 1130 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 PRKCEQ02156 737 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 GRB10Q13322 594 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 NNTQ13423 1086 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 RIT2Q99578 217 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 DDX4Q9NQI0 724 aaKnown RBP13.18□□□□□ -0.3
PTPRK-203ENST00000368207 NOVA2Q9UNW9 492 aaKnown RBP13.18□□□□□ -0.3
PTPRK-203ENST00000368207 CD44P16070 742 aaKnown RBP13.18□□□□□ -0.3
PTPRK-203ENST00000368207 GYS2P54840 703 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 TMED2Q15363 201 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 DUOXA2Q1HG44 320 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 WHAMMQ8TF30 809 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 UBE4BO95155 1302 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 GRIK5Q16478 980 aa13.18□□□□□ -0.3
PTPRK-203ENST00000368207 PRKCBP05771 671 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 FMO5P49326 533 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 ARHGEF18Q6ZSZ5 1173 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 EP400NLQ6ZTU2 488 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 CDKL2Q92772 493 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 SUCLA2Q9P2R7 463 aaPredicted RBP13.17□□□□□ -0.3
PTPRK-203ENST00000368207 AFG3L2Q9Y4W6 797 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 FHOD1Q9Y613 1164 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 HUS1O60921 280 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 ZBED1O96006 694 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 GNAT1P11488 350 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 ATP11AP98196 1134 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 SCYL1Q96KG9 808 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 STK38LQ9Y2H1 464 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 SYNGAP1Q96PV0 1343 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 RSPH10B2B2RC85 870 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 MED24O75448 989 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 CPP00450 1065 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 RSPH10BP0C881 870 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 PLS3P13797 630 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 TBXAS1P24557 533 aaPredicted RBP13.17□□□□□ -0.3
PTPRK-203ENST00000368207 SHMT1P34896 483 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 EDRF1Q3B7T1 1238 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 EMBQ6PCB8 327 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 PPFIBP2Q8ND30 876 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 CAMTA1Q9Y6Y1 1673 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 M0QYV0 167 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 TNPO2O14787 897 aaKnown RBP13.17□□□□□ -0.3
PTPRK-203ENST00000368207 DYNC1LI2O43237 492 aaPredicted RBP13.17□□□□□ -0.3
PTPRK-203ENST00000368207 CYP11B2P19099 503 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 SNRNP35Q16560 246 aaKnown RBP13.17□□□□□ -0.3
PTPRK-203ENST00000368207 WDR72Q3MJ13 1102 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 SLC30A10Q6XR72 485 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 PFDN4Q9NQP4 134 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 BAIAP2L1Q9UHR4 511 aa13.17□□□□□ -0.3
PTPRK-203ENST00000368207 SPDYE16A6NNV3 312 aaPredicted RBP13.16□□□□□ -0.3
PTPRK-203ENST00000368207 RASGRF2O14827 1237 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 PSMC1P62191 440 aaKnown RBP13.16□□□□□ -0.3
PTPRK-203ENST00000368207 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 C4orf50Q6ZRC1 276 aa13.16□□□□□ -0.3
PTPRK-203ENST00000368207 SCYL3Q8IZE3 742 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms