RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 ALG6Q9Y672 507 aa13.33□□□□□ -0.27
PTPN7-202ENST00000367279 GTPBP10A4D1E9 387 aaKnown RBP13.33□□□□□ -0.28
PTPN7-202ENST00000367279 PSMD10O75832 226 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 HNRNPH1P31943 449 aaKnown RBP13.33□□□□□ -0.28
PTPN7-202ENST00000367279 CDR1P51861 262 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 SETQ01105 290 aaPredicted RBP13.33□□□□□ -0.28
PTPN7-202ENST00000367279 DACT2Q5SW24 774 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 NSMFQ6X4W1 530 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 MIER3Q7Z3K6 550 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 ARHGEF19Q8IW93 802 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 CPXCR1Q8N123 301 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 KRT35Q92764 455 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 KAT5Q92993 513 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 MASTLQ96GX5 879 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 CCDC114Q96M63 670 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 SCAF8Q9UPN6 1271 aaKnown RBP13.33□□□□□ -0.28
PTPN7-202ENST00000367279 TMEM150BA6NC51 233 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 H0YGN5 161 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 IPO5O00410 1097 aaKnown RBP13.33□□□□□ -0.28
PTPN7-202ENST00000367279 SPOPO43791 374 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 SHBGP04278 402 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 QPCTQ16769 361 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 STRIP1Q5VSL9 837 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 PADI6Q6TGC4 694 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 PHLDB2Q86SQ0 1253 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 DHX37Q8IY37 1157 aaKnown RBP13.33□□□□□ -0.28
PTPN7-202ENST00000367279 RASGEF1CQ8N431 466 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 BORCS6Q96GS4 357 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 INTUQ9ULD6 942 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 NFS1Q9Y697 457 aa13.33□□□□□ -0.28
PTPN7-202ENST00000367279 DDX3YO15523 660 aaKnown RBP13.32□□□□□ -0.28
PTPN7-202ENST00000367279 CAND2O75155 1236 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 BIRC3Q13489 604 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 DENND2CQ68D51 928 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 NLGN1Q8N2Q7 840 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 ZSWIM2Q8NEG5 633 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 SLC30A5Q8TAD4 765 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.32□□□□□ -0.28
PTPN7-202ENST00000367279 NAP1L3Q99457 506 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-202ENST00000367279 PSMD1Q99460 953 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 CBWD1Q9BRT8 395 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 IDI2Q9BXS1 227 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 ANKRD62A6NC57 917 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 TAX1BP1Q86VP1 789 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 COL23A1Q86Y22 540 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-202ENST00000367279 CCDC105Q8IYK2 499 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 UBL4BQ8N7F7 174 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 RAPGEF5Q92565 580 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 EHMT1Q9H9B1 1298 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 RASAL2Q9UJF2 1139 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 MYH11P35749 1972 aa13.32□□□□□ -0.28
PTPN7-202ENST00000367279 ANXA13P27216 316 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 CHRNA5P30532 468 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 MAP2K1Q02750 393 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-202ENST00000367279 SEL1L2Q5TEA6 688 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 JAMLQ86YT9 394 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 FBXO25Q8TCJ0 367 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 ERP44Q9BS26 406 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 KLRG2A4D1S0 409 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-202ENST00000367279 CTNND1O60716 968 aaKnown RBP13.31□□□□□ -0.28
PTPN7-202ENST00000367279 CYP3A4P08684 503 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 FGFR4P22455 802 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 KCNJ1P48048 391 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 VAMP7P51809 220 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 PMS2P54278 862 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 NPEPPSP55786 919 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 CPNE8Q86YQ8 564 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 WDR11Q9BZH6 1224 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 GPR88Q9GZN0 384 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 IFNAR2P48551 515 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 PTENP60484 403 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 PPP3CAQ08209 521 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 GRIPAP1Q4V328 841 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 SLC27A3Q5K4L6 730 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 CC2D2BQ6DHV5 1058 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 MKNK1Q9BUB5 465 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 AZI2Q9H6S1 392 aa13.31□□□□□ -0.28
PTPN7-202ENST00000367279 LARSQ9P2J5 1176 aaKnown RBP13.31□□□□□ -0.28
PTPN7-202ENST00000367279 DDX20Q9UHI6 824 aaKnown RBP13.31□□□□□ -0.28
PTPN7-202ENST00000367279 MRPL11Q9Y3B7 192 aaKnown RBP13.31□□□□□ -0.28
PTPN7-202ENST00000367279 CCDC169A6NNP5 214 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 SGPL1O95470 568 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 CPP00450 1065 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 COMTP21964 271 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 SNX1Q13596 522 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 FRMPD4Q14CM0 1322 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 SPATS2Q86XZ4 545 aaKnown RBP13.3□□□□□ -0.28
PTPN7-202ENST00000367279 CACNA2D3Q8IZS8 1091 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 SLC5A5Q92911 643 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 CARD9Q9H257 536 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 GPRC5CQ9NQ84 441 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 NENFQ9UMX5 172 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 SLC16A4O15374 487 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 RGS16O15492 202 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-202ENST00000367279 CYP26A1O43174 497 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 PEX3P56589 373 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 PPATQ06203 517 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 PPP2R5CQ13362 524 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 CCDC38Q502W7 563 aa13.3□□□□□ -0.28
PTPN7-202ENST00000367279 HOOK3Q86VS8 718 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms