RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 USH1GQ495M9 461 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 SPDYCQ5MJ68 293 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 DAB2IPQ5VWQ8 1189 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 LMBR1LQ6UX01 489 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 DZIP1Q86YF9 867 aaKnown RBP9.03□□□□□ -0.96
CD46-209ENST00000367047 LRRC43Q8N309 656 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 GIMAP8Q8ND71 665 aaPredicted RBP9.03□□□□□ -0.96
CD46-209ENST00000367047 TTLL11Q8NHH1 800 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 DGCR14Q96DF8 476 aaKnown RBP9.03□□□□□ -0.96
CD46-209ENST00000367047 TTC1Q99614 292 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 SLCO1B3Q9NPD5 702 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 TCP11L1Q9NUJ3 509 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 NKIRAS1Q9NYS0 192 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 IL1RAPL1Q9NZN1 696 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 ARPP21Q9UBL0 812 aaPredicted RBP9.03□□□□□ -0.96
CD46-209ENST00000367047 TMED5Q9Y3A6 229 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 NUB1Q9Y5A7 615 aa9.03□□□□□ -0.96
CD46-209ENST00000367047 CEP170BQ9Y4F5 1589 aaPredicted RBP9.03□□□□□ -0.96
CD46-209ENST00000367047 EIF3FO00303 357 aaPredicted RBP9.02□□□□□ -0.97
CD46-209ENST00000367047 RGL2O15211 777 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 DCTN3O75935 186 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 BMP15O95972 392 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 SERPING1P05155 500 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 KRT13P13646 458 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 XBP1P17861 261 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 TAC1P20366 129 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 SMARCA1P28370 1054 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 RGS2P41220 211 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 YARSP54577 528 aaKnown RBP9.02□□□□□ -0.97
CD46-209ENST00000367047 KLHL30Q0D2K2 578 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 MKRN3Q13064 507 aaKnown RBP9.02□□□□□ -0.97
CD46-209ENST00000367047 SLC18A3Q16572 532 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 EXOC3L4Q17RC7 722 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 DUPD1Q68J44 220 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 SLC2A7Q6PXP3 512 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 MPRIPQ6WCQ1 1025 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 B3GNT6Q6ZMB0 384 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 RBM44Q6ZP01 1051 aaKnown RBP9.02□□□□□ -0.97
CD46-209ENST00000367047 CROCCP2Q86T23 111 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 SGMS1Q86VZ5 419 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 GAB3Q8WWW8 586 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 TRIM11Q96F44 468 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 STK33Q9BYT3 514 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 AIPL1Q9NZN9 384 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 DOLKQ9UPQ8 538 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 MYO5AQ9Y4I1 1855 aaKnown RBP9.02□□□□□ -0.97
CD46-209ENST00000367047 RBAK-RBAKDNI3L0D1 243 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 GYG2O15488 501 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 RIPK2O43353 540 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 ADCY3O60266 1144 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 EYA4O95677 639 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 COL6A2P12110 1019 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 GEMIN4P57678 1058 aaKnown RBP9.02□□□□□ -0.97
CD46-209ENST00000367047 ATP2C1P98194 919 aaPredicted RBP9.02□□□□□ -0.97
CD46-209ENST00000367047 C6orf183Q5T699 404 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 DQX1Q8TE96 717 aaKnown RBP9.02□□□□□ -0.97
CD46-209ENST00000367047 APPBP2Q92624 585 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 GRAMD1AQ96CP6 724 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 SHISA4Q96DD7 197 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 MAGEB18Q96M61 343 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 ECSITQ9BQ95 431 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 CCDC28BQ9BUN5 200 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 METTL14Q9HCE5 456 aaKnown RBP9.02□□□□□ -0.97
CD46-209ENST00000367047 PTTG2Q9NZH5 202 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 ZNF212Q9UDV6 495 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 CNOT7Q9UIV1 285 aaKnown RBP9.02□□□□□ -0.97
CD46-209ENST00000367047 ZFP69BQ9UJL9 534 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 CROTQ9UKG9 612 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 PPP1R9AQ9ULJ8 1098 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 NRKQ7Z2Y5 1582 aa9.02□□□□□ -0.97
CD46-209ENST00000367047 NBPF26B4DH59 902 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 ATP5J2-PTCD1G3V325 749 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 CES2O00748 559 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 KLRC4O43908 158 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 EXOC3O60645 756 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 PTCD1O75127 700 aaKnown RBP9.01□□□□□ -0.97
CD46-209ENST00000367047 STK10O94804 968 aaKnown RBP9.01□□□□□ -0.97
CD46-209ENST00000367047 EMP3P54852 163 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 PKN1Q16512 942 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 KIAA1755Q5JYT7 1200 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 ZDHHC24Q6UX98 284 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 BTNL9Q6UXG8 535 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 MTDHQ86UE4 582 aaKnown RBP9.01□□□□□ -0.97
CD46-209ENST00000367047 SRRM1Q8IYB3 904 aaKnown RBP9.01□□□□□ -0.97
CD46-209ENST00000367047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.01□□□□□ -0.972e-8■□□□□ 9.9
CD46-209ENST00000367047 ERMNQ8TAM6 284 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 UBA5Q9GZZ9 404 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 EBF3Q9H4W6 596 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 DDX43Q9NXZ2 648 aaKnown RBP9.01□□□□□ -0.97
CD46-209ENST00000367047 ARMCX3Q9UH62 379 aaPredicted RBP9.01□□□□□ -0.97
CD46-209ENST00000367047 PHTF1Q9UMS5 762 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 RPL26L1Q9UNX3 145 aaKnown RBP9.01□□□□□ -0.97
CD46-209ENST00000367047 UMODL1Q5DID0 1318 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 CLTCQ00610 1675 aaKnown RBP9.01□□□□□ -0.97
CD46-209ENST00000367047 DYTNA2CJ06 578 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 PRPF3O43395 683 aaKnown RBP9.01□□□□□ -0.97
CD46-209ENST00000367047 RHOBTB3O94955 611 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 SERPINB8P50452 374 aa9.01□□□□□ -0.97
CD46-209ENST00000367047 POU5F1Q01860 360 aaKnown RBP9.01□□□□□ -0.97
CD46-209ENST00000367047 TMEM266Q2M3C6 531 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms