RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TYW1Q9NV66 732 aaKnown RBP15.96■□□□□ 0.14
PRKN-204ENST00000366896 NAGPAQ9UK23 515 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 ODF2LQ9ULJ1 636 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 DNM3Q9UQ16 869 aa15.96■□□□□ 0.14
PRKN-204ENST00000366896 RPL13P26373 211 aaKnown RBP15.95■□□□□ 0.14
PRKN-204ENST00000366896 PON1P27169 355 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 CIITAP33076 1130 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 BIRC3Q13489 604 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 UAP1Q16222 522 aaPredicted RBP15.95■□□□□ 0.14
PRKN-204ENST00000366896 SPRED3Q2MJR0 410 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 DCAF17Q5H9S7 520 aaPredicted RBP15.95■□□□□ 0.14
PRKN-204ENST00000366896 FAM228AQ86W67 206 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.95■□□□□ 0.14
PRKN-204ENST00000366896 LMBR1Q8WVP7 490 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 SGSM3Q96HU1 749 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 OTOFQ9HC10 1997 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 A0A1W2PRG0 241 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 CCDC188H7C350 402 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 KCNK3O14649 394 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 AKAP3O75969 853 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 XRCC5P13010 732 aaKnown RBP15.95■□□□□ 0.14
PRKN-204ENST00000366896 JAM2P57087 298 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 ERVK-9P63128 1117 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 EPHA7Q15375 998 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 QPCTQ16769 361 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 SCYL3Q8IZE3 742 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 N4BP2L2Q92802 583 aaPredicted RBP15.95■□□□□ 0.14
PRKN-204ENST00000366896 LENG9Q96B70 501 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 SPAG5Q96R06 1193 aa15.95■□□□□ 0.14
PRKN-204ENST00000366896 PPP1R12BO60237 982 aaPredicted RBP15.94■□□□□ 0.14
PRKN-204ENST00000366896 PAEPP09466 180 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 ZNF844Q08AG5 666 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 LACTB2Q53H82 288 aaPredicted RBP15.94■□□□□ 0.14
PRKN-204ENST00000366896 SLFN13Q68D06 897 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 BANK1Q8NDB2 785 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 LRRC45Q96CN5 670 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 SEC16BQ96JE7 1060 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 DAAM1Q9Y4D1 1078 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 ASTN1O14525 1302 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 FAM86B1E9PN63 330 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 FAM86B2P0C5J1 330 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 SREBF1P36956 1147 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 CASP4P49662 377 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 CYP4A11Q02928 519 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 KCNA1Q09470 495 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 BYSLQ13895 437 aaKnown RBP15.94■□□□□ 0.14
PRKN-204ENST00000366896 HLTFQ14527 1009 aaKnown RBP eCLIP15.94■□□□□ 0.14
PRKN-204ENST00000366896 NOL9Q5SY16 702 aaKnown RBP15.94■□□□□ 0.14
PRKN-204ENST00000366896 ALKBH5Q6P6C2 394 aaKnown RBP15.94■□□□□ 0.14
PRKN-204ENST00000366896 GJB7Q6PEY0 223 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 RUFY4Q6ZNE9 571 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 VPS36Q86VN1 386 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 RASGEF1CQ8N431 466 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 PROCA1Q8NCQ7 364 aaPredicted RBP15.94■□□□□ 0.14
PRKN-204ENST00000366896 ACER1Q8TDN7 264 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 MIEF2Q96C03 454 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 POLR3CQ9BUI4 534 aaPredicted RBP15.94■□□□□ 0.14
PRKN-204ENST00000366896 IKZF4Q9H2S9 585 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 ARHGEF10LQ9HCE6 1279 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 OLFML3Q9NRN5 406 aa15.94■□□□□ 0.14
PRKN-204ENST00000366896 ECE1P42892 770 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 USH1GQ495M9 461 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 AGBL2Q5U5Z8 902 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 ARMC9Q7Z3E5 817 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 SYCE1Q8N0S2 351 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 OR2W6PQ8NHA6 318 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 SIX2Q9NPC8 291 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 SUCLA2Q9P2R7 463 aaPredicted RBP15.93■□□□□ 0.14
PRKN-204ENST00000366896 SYNPO2Q9UMS6 1093 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 CLGNO14967 610 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 GAP43P17677 238 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 PPP2R2AP63151 447 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 XRCC4Q13426 336 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 TAX1BP1Q86VP1 789 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 FMNL3Q8IVF7 1028 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 TPCN2Q8NHX9 752 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.93■□□□□ 0.14
PRKN-204ENST00000366896 RUSC1Q9BVN2 902 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 AMNQ9BXJ7 453 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 HAUS2Q9NVX0 235 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 TTC7AQ9ULT0 858 aaPredicted RBP15.93■□□□□ 0.14
PRKN-204ENST00000366896 TPX2Q9ULW0 747 aaKnown RBP15.93■□□□□ 0.14
PRKN-204ENST00000366896 STXBP5LQ9Y2K9 1186 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 TMX2Q9Y320 296 aa15.93■□□□□ 0.14
PRKN-204ENST00000366896 PGRMC1O00264 195 aaKnown RBP15.92■□□□□ 0.14
PRKN-204ENST00000366896 TMOD1P28289 359 aa15.92■□□□□ 0.14
PRKN-204ENST00000366896 CTNNA1P35221 906 aaKnown RBP15.92■□□□□ 0.14
PRKN-204ENST00000366896 SCTRP47872 440 aa15.92■□□□□ 0.14
PRKN-204ENST00000366896 TCERG1LQ5VWI1 586 aa15.92■□□□□ 0.14
PRKN-204ENST00000366896 CACNA2D3Q8IZS8 1091 aa15.92■□□□□ 0.14
PRKN-204ENST00000366896 P3H4Q92791 437 aa15.92■□□□□ 0.14
PRKN-204ENST00000366896 SLC35C1Q96A29 364 aa15.92■□□□□ 0.14
PRKN-204ENST00000366896 AP1M1Q9BXS5 423 aa15.92■□□□□ 0.14
PRKN-204ENST00000366896 SLITRK6Q9H5Y7 841 aa15.92■□□□□ 0.14
PRKN-204ENST00000366896 PHIPQ8WWQ0 1821 aa15.92■□□□□ 0.14
PRKN-204ENST00000366896 CLIC2O15247 247 aa15.92■□□□□ 0.14
PRKN-204ENST00000366896 EIF3DO15371 548 aaKnown RBP eCLIP15.92■□□□□ 0.14
PRKN-204ENST00000366896 CEP104O60308 925 aa15.92■□□□□ 0.14
PRKN-204ENST00000366896 NR3C1P04150 777 aa15.92■□□□□ 0.14
PRKN-204ENST00000366896 CYP3A4P08684 503 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms