RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 CYTH1Q15438 398 aa16.7■□□□□ 0.26
FBXO28-201ENST00000366862 OR6B2Q6IFH4 312 aa16.7■□□□□ 0.26
FBXO28-201ENST00000366862 POTEAQ6S8J7 498 aa16.7■□□□□ 0.26
FBXO28-201ENST00000366862 KIF2BQ8N4N8 673 aa16.7■□□□□ 0.26
FBXO28-201ENST00000366862 KCNK16Q96T55 309 aa16.7■□□□□ 0.26
FBXO28-201ENST00000366862 FAM129AQ9BZQ8 928 aa16.7■□□□□ 0.26
FBXO28-201ENST00000366862 FOXP3Q9BZS1 431 aa16.7■□□□□ 0.26
FBXO28-201ENST00000366862 SOX5P35711 763 aa16.7■□□□□ 0.26
FBXO28-201ENST00000366862 RIBC1Q8N443 379 aaPredicted RBP16.7■□□□□ 0.26
FBXO28-201ENST00000366862 DDX56Q9NY93 547 aaKnown RBP16.7■□□□□ 0.26
FBXO28-201ENST00000366862 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.7■□□□□ 0.26
FBXO28-201ENST00000366862 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
FBXO28-201ENST00000366862 DCAF8L1A6NGE4 600 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 IL10P22301 178 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 FRMD5Q7Z6J6 570 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 ADSSL1Q8N142 457 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 BBS5Q8N3I7 341 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 METTL13Q8N6R0 699 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 OR2W6PQ8NHA6 318 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 ZBTB18Q99592 522 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 BHMT2Q9H2M3 363 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 CHCHD3Q9NX63 227 aaKnown RBP16.69■□□□□ 0.26
FBXO28-201ENST00000366862 PKD2L2Q9NZM6 624 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 E2F6O75461 281 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 ALX1Q15699 326 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 TTC7AQ9ULT0 858 aaPredicted RBP16.69■□□□□ 0.26
FBXO28-201ENST00000366862 DISP1Q96F81 1524 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 SYNJ2BP-COX16A0A087WUM0 186 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 ASAP2O43150 1006 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 SYF2O95926 243 aaKnown RBP16.69■□□□□ 0.26
FBXO28-201ENST00000366862 GYPCP04921 128 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 MAP4P27816 1152 aaKnown RBP16.69■□□□□ 0.26
FBXO28-201ENST00000366862 INTS2Q9H0H0 1204 aaKnown RBP16.69■□□□□ 0.26
FBXO28-201ENST00000366862 DDX28Q9NUL7 540 aaKnown RBP16.69■□□□□ 0.26
FBXO28-201ENST00000366862 COX16Q9P0S2 106 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 GOLGA8MH3BSY2 632 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 MRPS15P82914 257 aaKnown RBP16.69■□□□□ 0.26
FBXO28-201ENST00000366862 ANKRD40Q6AI12 368 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 SFR1Q86XK3 245 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 COL23A1Q86Y22 540 aaPredicted RBP16.69■□□□□ 0.26
FBXO28-201ENST00000366862 USP38Q8NB14 1042 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 PBXIP1Q96AQ6 731 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 TRIM10Q9UDY6 481 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 SEPT9Q9UHD8 586 aaPredicted RBP16.69■□□□□ 0.26
FBXO28-201ENST00000366862 IP6K2Q9UHH9 426 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 KDSRQ06136 332 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 AP3B2Q13367 1082 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 SLC12A1Q13621 1099 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 TRAPPC11Q7Z392 1133 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 MTBPQ96DY7 904 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 NPHS2Q9NP85 383 aa16.69■□□□□ 0.26
FBXO28-201ENST00000366862 ACBD5Q5T8D3 534 aaPredicted RBP16.68■□□□□ 0.26
FBXO28-201ENST00000366862 VPS11Q9H270 941 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 UBN1Q9NPG3 1134 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 ZNF804BA4D1E1 1349 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 ZNF233A6NK53 670 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 H3BRJ5 948 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 CCDC159P0C7I6 412 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 HSPH1Q92598 858 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 TRIM51Q9BSJ1 452 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 CCDC90BQ9GZT6 254 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 TMEM120BA0PK00 339 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 H3BQF6 201 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 KRT8P05787 483 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 SCP2P22307 547 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 SMARCA1P28370 1054 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 SLC1A1P43005 524 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 LAMB3Q13751 1172 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 TXNRD1Q16881 649 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 LONRF1Q17RB8 773 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 NAIF1Q69YI7 327 aaPredicted RBP16.68■□□□□ 0.26
FBXO28-201ENST00000366862 TMEM35BQ8NCS4 154 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 SLC7A3Q8WY07 619 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 ASCC2Q9H1I8 757 aaPredicted RBP16.68■□□□□ 0.26
FBXO28-201ENST00000366862 SEPT3Q9UH03 358 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 DBR1Q9UK59 544 aaKnown RBP16.68■□□□□ 0.26
FBXO28-201ENST00000366862 LRRIQ3A6PVS8 624 aaPredicted RBP16.68■□□□□ 0.26
FBXO28-201ENST00000366862 PAMP19021 973 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 AARSP49588 968 aaKnown RBP eCLIP16.68■□□□□ 0.26
FBXO28-201ENST00000366862 USP17L2Q6R6M4 530 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 C1orf54Q8WWF1 131 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 SCG3Q8WXD2 468 aaKnown RBP16.68■□□□□ 0.26
FBXO28-201ENST00000366862 CMTM5Q96DZ9 223 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 ANO3Q9BYT9 981 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 CCPG1Q9ULG6 757 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 LZTS1Q9Y250 596 aa16.68■□□□□ 0.26
FBXO28-201ENST00000366862 UBTFL6P0CB48 400 aaPredicted RBP16.67■□□□□ 0.26
FBXO28-201ENST00000366862 GHRP10912 638 aa16.67■□□□□ 0.26
FBXO28-201ENST00000366862 PAPOLAP51003 745 aaKnown RBP16.67■□□□□ 0.26
FBXO28-201ENST00000366862 UBE2SQ16763 222 aa16.67■□□□□ 0.26
FBXO28-201ENST00000366862 SUPT3HO75486 399 aa16.67■□□□□ 0.26
FBXO28-201ENST00000366862 KRT75O95678 551 aa16.67■□□□□ 0.26
FBXO28-201ENST00000366862 FLOT2Q14254 428 aa16.67■□□□□ 0.26
FBXO28-201ENST00000366862 ABCB5Q2M3G0 1257 aa16.67■□□□□ 0.26
FBXO28-201ENST00000366862 RSRC2Q7L4I2 434 aaKnown RBP16.67■□□□□ 0.26
FBXO28-201ENST00000366862 GLYCTKQ8IVS8 523 aa16.67■□□□□ 0.26
FBXO28-201ENST00000366862 NSL1Q96IY1 281 aa16.67■□□□□ 0.26
FBXO28-201ENST00000366862 C10orf88Q9H8K7 445 aa16.67■□□□□ 0.26
FBXO28-201ENST00000366862 KLHL2O95198 593 aa16.67■□□□□ 0.26
FBXO28-201ENST00000366862 ALDH18A1P54886 795 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms