RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 MIS18BP1Q6P0N0 1132 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 DCUN1D2Q6PH85 259 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ARMCX6Q7L4S7 300 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 CPXCR1Q8N123 301 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZNF653Q96CK0 615 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MTMR9Q96QG7 549 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 DRC3Q9H069 523 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 AIPL1Q9NZN9 384 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 GMNCA6NCL1 334 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 USP17L15C9J2P7 530 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 USP17L13C9JLJ4 530 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 USP17L11C9JVI0 530 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 USP17L18D6R9N7 530 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 USP17L22D6RA61 530 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 USP17L17D6RBQ6 530 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 USP17L19D6RCP7 530 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 USP17L20D6RJB6 530 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MAPTP10636 758 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 HNRNPH3P31942 346 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 RNASELQ05823 741 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 USP17L24Q0WX57 530 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 CDC42EP5Q6NZY7 148 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 USP17L6PQ6QN14 398 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 TMEM139Q8IV31 216 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ACTRT1Q8TDG2 376 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 AGPAT1Q99943 283 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 AZI2Q9H6S1 392 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 QTRT2Q9H974 415 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 BATF3Q9NR55 127 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 PLAAQ9Y263 795 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 TSC22D4Q9Y3Q8 395 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 RTN2O75298 545 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 TRPA1O75762 1119 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 POLD1P28340 1107 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 QARSP47897 775 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 ACBD5Q5T8D3 534 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 TRIM72Q6ZMU5 477 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 TRMT1LQ7Z2T5 733 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZBTB8OSQ8IWT0 167 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 CCDC89Q8N998 374 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 PDZD8Q8NEN9 1154 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 SEPT8Q92599 483 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 GFM2Q969S9 779 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 GMCL1Q96IK5 515 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 RMDN2Q96LZ7 410 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 OLFM3Q96PB7 478 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 NOVA2Q9UNW9 492 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 GAKO14976 1311 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 ENO4A6NNW6 628 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 KDM1AO60341 852 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 CYP11B2P19099 503 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 TNFRSF8P28908 595 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 SLC1A1P43005 524 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 AARSP49588 968 aaKnown RBP eCLIP5.74□□□□□ -1.493e-6■□□□□ 8.7
CDC42BPA-204ENST00000366767 CUL3Q13618 768 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 CTTNQ14247 550 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 SPDYCQ5MJ68 293 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 KLHDC7AQ5VTJ3 777 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 FAM160B1Q5W0V3 765 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 TBC1D1Q86TI0 1168 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZNF513Q8N8E2 541 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 C4orf32Q8N8J7 132 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 KLC4Q9NSK0 619 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 G3BP2Q9UN86 482 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 MYH9P35579 1960 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 GH2P01242 217 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 GFAPP14136 432 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 AP3M2P53677 418 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 PPP2R2AP63151 447 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 DRAP1Q14919 205 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 USP38Q8NB14 1042 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 IFT122Q9HBG6 1241 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 PKD2L1Q9P0L9 805 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 TESPA1A2RU30 521 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZNF233A6NK53 670 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 EIF3HO15372 352 aaKnown RBP eCLIP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 TNNC2P02585 160 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 ADCY8P40145 1251 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 DHX9Q08211 1270 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 TTBK2Q6IQ55 1244 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZC3H18Q86VM9 953 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 NOA1Q8NC60 698 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 CERKQ8TCT0 537 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 SLC4A7Q9Y6M7 1214 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 SGO2Q562F6 1265 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 NSMFQ6X4W1 530 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 PCGF5Q86SE9 256 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 RDM1Q8NG50 284 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 LRRC8CQ8TDW0 803 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 GPR101Q96P66 508 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 PNMA5Q96PV4 448 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 POTEFA5A3E0 1075 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 WDR64B1ANS9 1081 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 MAFGO15525 162 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 KLRC4O43908 158 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 CRCPO75575 148 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 GDF11O95390 407 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 PSAPP07602 524 aa5.74□□□□□ -1.49
CDC42BPA-204ENST00000366767 POTEIP0CG38 1075 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms