RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 DDX53Q86TM3 631 aaKnown RBP13.13□□□□□ -0.31
MRPL55-213ENST00000366740 VPS52Q8N1B4 723 aa13.13□□□□□ -0.31
MRPL55-213ENST00000366740 REXO1Q8N1G1 1221 aaKnown RBP13.13□□□□□ -0.31
MRPL55-213ENST00000366740 RNF169Q8NCN4 708 aa13.13□□□□□ -0.31
MRPL55-213ENST00000366740 ZNF668Q96K58 619 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-213ENST00000366740 C6orf50Q9HD87 102 aa13.13□□□□□ -0.31
MRPL55-213ENST00000366740 CHST12Q9NRB3 414 aa13.13□□□□□ -0.31
MRPL55-213ENST00000366740 SAMM50Q9Y512 469 aa13.13□□□□□ -0.31
MRPL55-213ENST00000366740 GVINP1Q7Z2Y8 2422 aa13.13□□□□□ -0.31
MRPL55-213ENST00000366740 CPLX1O14810 134 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 PHKA2P46019 1235 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 NPY5RQ15761 445 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 ATAT1Q5SQI0 421 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 C12orf76Q8N812 135 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-213ENST00000366740 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 FEZF2Q8TBJ5 459 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 CCDC12Q8WUD4 166 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-213ENST00000366740 BCL7CQ8WUZ0 217 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-213ENST00000366740 AUTS2Q8WXX7 1259 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 IGSF21Q96ID5 467 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 CEP89Q96ST8 783 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 SLKQ9H2G2 1235 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-213ENST00000366740 NRDE2Q9H7Z3 1164 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 DISC1Q9NRI5 854 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 NRBP2Q9NSY0 501 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 DBR1Q9UK59 544 aaKnown RBP13.12□□□□□ -0.31
MRPL55-213ENST00000366740 CACNA1AO00555 2505 aa13.12□□□□□ -0.31
MRPL55-213ENST00000366740 DMXL1Q9Y485 3027 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 IGKV6-21A0A0C4DH24 114 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 MSH4O15457 936 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 EIF5BO60841 1220 aaKnown RBP13.11□□□□□ -0.31
MRPL55-213ENST00000366740 ZC3H11AO75152 810 aaKnown RBP eCLIP13.11□□□□□ -0.31
MRPL55-213ENST00000366740 DEXIO95424 95 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 GNA11P29992 359 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 SFNP31947 248 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 CA8P35219 290 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 JAK3P52333 1124 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 CDC42EP1Q00587 391 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 TBC1D8BQ0IIM8 1120 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 DRP2Q13474 957 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 PTPN14Q15678 1187 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 KANK3Q6NY19 840 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 TRIM22Q8IYM9 498 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 NLRP7Q8WX94 980 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 RIT2Q99578 217 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 VN1R3Q9BXE9 311 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 SFXN1Q9H9B4 322 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 SH3GLB2Q9NR46 395 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 CYP26B1Q9NR63 512 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 GJB4Q9NTQ9 266 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 TBC1D13Q9NVG8 400 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 LIMD1Q9UGP4 676 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 NOTCH4Q99466 2003 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 CACNA1IQ9P0X4 2223 aa13.11□□□□□ -0.31
MRPL55-213ENST00000366740 M0R2N6 131 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 ZNF623O75123 536 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 CSDE1O75534 798 aaKnown RBP13.1□□□□□ -0.31
MRPL55-213ENST00000366740 GALTP07902 379 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 SKIP12755 728 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 FDPSP14324 419 aaKnown RBP13.1□□□□□ -0.31
MRPL55-213ENST00000366740 NPR3P17342 541 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 AOC1P19801 751 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 SFPQP23246 707 aaKnown RBP eCLIP13.1□□□□□ -0.31
MRPL55-213ENST00000366740 NLRP5P59047 1200 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 ANKRD1Q15327 319 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 FRMD5Q7Z6J6 570 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 GPR149Q86SP6 731 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 ZNF410Q86VK4 478 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 PPFIBP1Q86W92 1011 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 CCDC148Q8NFR7 591 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 SLC5A5Q92911 643 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 LPPQ93052 612 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 NKD2Q969F2 451 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-213ENST00000366740 SCLT1Q96NL6 688 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 NIFKQ9BYG3 293 aaKnown RBP13.1□□□□□ -0.31
MRPL55-213ENST00000366740 GCOM2Q9BZD3 368 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-213ENST00000366740 MFSD1Q9H3U5 465 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 DUSP12Q9UNI6 340 aa13.1□□□□□ -0.31
MRPL55-213ENST00000366740 PDCD11Q14690 1871 aaKnown RBP13.1□□□□□ -0.31
MRPL55-213ENST00000366740 WDR87Q6ZQQ6 2873 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 A0A087WZ62 844 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 MEIS3P2A8K0S8 358 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 B4GALT3O60512 393 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 OFD1O75665 1012 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 STBD1O95210 358 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 RAB27AP51159 221 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 CLCN4P51793 760 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 NOMO2Q5JPE7 1267 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 TWF2Q6IBS0 349 aaKnown RBP13.09□□□□□ -0.31
MRPL55-213ENST00000366740 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
MRPL55-213ENST00000366740 GLB1LQ6UWU2 654 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 B3GNT9Q6UX72 402 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 TMC5Q6UXY8 1006 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 C15orf39Q6ZRI6 1047 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 CCDC149Q6ZUS6 474 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 ERMP1Q7Z2K6 904 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 CABP7Q86V35 215 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 CCDC105Q8IYK2 499 aa13.09□□□□□ -0.31
MRPL55-213ENST00000366740 RDM1Q8NG50 284 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms