RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ZDHHC15Q96MV8 337 aa14.42□□□□□ -0.1
LDB3-202ENST00000361373 FMO2Q99518 471 aa14.42□□□□□ -0.1
LDB3-202ENST00000361373 SUN1O94901 812 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 PRKCBP05771 671 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 ZNF157P51786 506 aaPredicted RBP14.41□□□□□ -0.1
LDB3-202ENST00000361373 RNF149Q8NC42 400 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 VPS39Q96JC1 886 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 ACAP3Q96P50 834 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 EVI5O60447 810 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 MT-ND3P03897 115 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 DRAP1Q14919 205 aaPredicted RBP14.41□□□□□ -0.1
LDB3-202ENST00000361373 RPUSD2Q8IZ73 545 aaKnown RBP14.41□□□□□ -0.1
LDB3-202ENST00000361373 HDAC11Q96DB2 347 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 CYP26B1Q9NR63 512 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 IP6K2Q9UHH9 426 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 ATP8A1Q9Y2Q0 1164 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 PP2D1A8MPX8 630 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 PGBD4Q96DM1 585 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 SUCLA2Q9P2R7 463 aaPredicted RBP14.41□□□□□ -0.1
LDB3-202ENST00000361373 ZWINTO95229 277 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 GNA15P30679 374 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 CYP4F22Q6NT55 531 aa14.41□□□□□ -0.1
LDB3-202ENST00000361373 RECQLP46063 649 aaPredicted RBP14.4□□□□□ -0.1
LDB3-202ENST00000361373 SREBF2Q12772 1141 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 ZNF394Q53GI3 561 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 HVCN1Q96D96 273 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 MXRA8Q9BRK3 442 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 PPP2R3BQ9Y5P8 575 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 KRT3P12035 628 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 PAMP19021 973 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 EDRF1Q3B7T1 1238 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 PHLDB3Q6NSJ2 640 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 SRRM1Q8IYB3 904 aaKnown RBP14.4□□□□□ -0.1
LDB3-202ENST00000361373 VPS33BQ9H267 617 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 JMJD4Q9H9V9 463 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 LMCD1Q9NZU5 365 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 ITSN1Q15811 1721 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 FGGP02679 453 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 CASP1P29466 404 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 SCN4BQ8IWT1 228 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 EHD4Q9H223 541 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 SLITRK6Q9H5Y7 841 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 ANKEF1Q9NU02 776 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 PITPNM2Q9BZ72 1349 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 TTI1O43156 1089 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 GAS2O43903 313 aaKnown RBP14.4□□□□□ -0.1
LDB3-202ENST00000361373 BUB1BO60566 1050 aaPredicted RBP14.4□□□□□ -0.1
LDB3-202ENST00000361373 PCK1P35558 622 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 ANTXR2P58335 489 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 EZH2Q15910 746 aaKnown RBP14.4□□□□□ -0.1
LDB3-202ENST00000361373 IER5Q5VY09 327 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 DAGLBQ8NCG7 672 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 KIF12Q96FN5 646 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 TTC25Q96NG3 672 aa14.4□□□□□ -0.1
LDB3-202ENST00000361373 DDX56Q9NY93 547 aaKnown RBP14.4□□□□□ -0.1
LDB3-202ENST00000361373 HGSO14964 777 aaPredicted RBP14.39□□□□□ -0.11
LDB3-202ENST00000361373 RHOBTB3O94955 611 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 PRR29P0C7W0 189 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 CXCR5P32302 372 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 IQCB1Q15051 598 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 CYFIP1Q7L576 1253 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 GPRASP2Q96D09 838 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.39□□□□□ -0.11
LDB3-202ENST00000361373 COL23A1Q86Y22 540 aaPredicted RBP14.39□□□□□ -0.11
LDB3-202ENST00000361373 BCAS4Q8TDM0 211 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 PYROXD1Q8WU10 500 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 CNTNAP5Q8WYK1 1306 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 CCL15-CCL14A0A0B4J2E2 113 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 IQANK1A0A1B0GTG1 560 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 M0QYV0 167 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 MYCP01106 439 aaPredicted RBP14.39□□□□□ -0.11
LDB3-202ENST00000361373 PLS3P13797 630 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 ATP1A2P50993 1020 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 STX1BP61266 288 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 RBBP5Q15291 538 aaKnown RBP14.39□□□□□ -0.11
LDB3-202ENST00000361373 CCL15Q16663 113 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 CDO1Q16878 200 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 BBS9Q3SYG4 887 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 C11orf70Q9BRQ4 267 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 ZWILCHQ9H900 591 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 EFCC1Q9HA90 598 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 FAM217BQ9NTX9 383 aaPredicted RBP14.39□□□□□ -0.11
LDB3-202ENST00000361373 RGL1Q9NZL6 768 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 FAM8A1Q9UBU6 413 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 HPCAL4Q9UM19 191 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 EMSYQ7Z589 1322 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 IQGAP1P46940 1657 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 RRN3P2A6NIE6 340 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 A8MXQ7 604 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 RPA1P27694 616 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 FXR2P51116 673 aaKnown RBP eCLIP14.39□□□□□ -0.11
LDB3-202ENST00000361373 VEPH1Q14D04 833 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 PPP6R3Q5H9R7 873 aaPredicted RBP14.39□□□□□ -0.11
LDB3-202ENST00000361373 RNF219Q5W0B1 726 aaPredicted RBP14.39□□□□□ -0.11
LDB3-202ENST00000361373 RWDD4Q6NW29 188 aaKnown RBP14.39□□□□□ -0.11
LDB3-202ENST00000361373 ATP6V1E2Q96A05 226 aa14.39□□□□□ -0.11
LDB3-202ENST00000361373 RASGRF2O14827 1237 aa14.38□□□□□ -0.11
LDB3-202ENST00000361373 ZFXP17010 805 aaPredicted RBP14.38□□□□□ -0.11
LDB3-202ENST00000361373 ARL4CP56559 192 aa14.38□□□□□ -0.11
LDB3-202ENST00000361373 PSMC1P62191 440 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms