RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 PSPC1Q8WXF1 523 aaKnown RBP13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 E9PMD0 336 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 COPEO14579 308 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 PMLP29590 882 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 GPSM2P81274 684 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 LRRC14Q15048 493 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 ENAHQ8N8S7 591 aaPredicted RBP13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 NSUN6Q8TEA1 469 aaKnown RBP13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 CEP95Q96GE4 821 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 ECT2Q9H8V3 914 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 KIAA1586Q9HCI6 787 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 ZFP69BQ9UJL9 534 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 CAPN11Q9UMQ6 739 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 IQGAP3Q86VI3 1631 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 ARHGAP10A1A4S6 786 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 SYF2O95926 243 aaKnown RBP13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 PADI6Q6TGC4 694 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 APOBEC3FQ8IUX4 373 aaKnown RBP13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 BATF3Q9NR55 127 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 CEP72Q9P209 647 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 TJP3O95049 919 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 KRT76Q01546 638 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 LY9Q9HBG7 655 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 USP17L15C9J2P7 530 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 USP17L13C9JLJ4 530 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 USP17L11C9JVI0 530 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 USP17L18D6R9N7 530 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 USP17L22D6RA61 530 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 USP17L17D6RBQ6 530 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 USP17L19D6RCP7 530 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 USP17L20D6RJB6 530 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 KDM1AO60341 852 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 GCLMP48507 274 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 NEK2P51955 445 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 PMS2P54278 862 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 USP17L24Q0WX57 530 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 USP17L6PQ6QN14 398 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 FAM20AQ96MK3 541 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 TMEM60Q9H2L4 133 aa13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 SUCLA2Q9P2R7 463 aaPredicted RBP13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 CNOT8Q9UFF9 292 aaKnown RBP13.01□□□□□ -0.33
CCDC144A-204ENST00000360524 CFAP73A6NFT4 308 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 FAM196BA6NMK8 535 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 SNAP23O00161 211 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 CLDN3O15551 220 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 PHKA2P46019 1235 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 CUL3Q13618 768 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 SPARCL1Q14515 664 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 SRRM1Q8IYB3 904 aaKnown RBP13□□□□□ -0.33
CCDC144A-204ENST00000360524 PDIK1LQ8N165 341 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 THEM5Q8N1Q8 247 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 MTA3Q9BTC8 594 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 TSR3Q9UJK0 312 aaKnown RBP13□□□□□ -0.33
CCDC144A-204ENST00000360524 HEY1Q9Y5J3 304 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 CIITAP33076 1130 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 EPHB1P54762 984 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 NFX1Q12986 1120 aaKnown RBP13□□□□□ -0.33
CCDC144A-204ENST00000360524 BZW1Q7L1Q6 419 aaKnown RBP13□□□□□ -0.33
CCDC144A-204ENST00000360524 MB21D2Q8IYB1 491 aaPredicted RBP13□□□□□ -0.33
CCDC144A-204ENST00000360524 KIAA2013Q8IYS2 634 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 NCLNQ969V3 563 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 ISCA1Q9BUE6 129 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 NGRNQ9NPE2 291 aaKnown RBP13□□□□□ -0.33
CCDC144A-204ENST00000360524 DCTN4Q9UJW0 460 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 SLC8A2Q9UPR5 921 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 GLI2P10070 1586 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 MYCP01106 439 aaPredicted RBP13□□□□□ -0.33
CCDC144A-204ENST00000360524 ORC2Q13416 577 aaPredicted RBP13□□□□□ -0.33
CCDC144A-204ENST00000360524 MAPK6Q16659 721 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 SLC44A5Q8NCS7 719 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 MXD3Q9BW11 206 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 ZNF302Q9NR11 478 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 H3BRJ5 948 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 NR3C1P04150 777 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 NOP14P78316 857 aaKnown RBP13□□□□□ -0.33
CCDC144A-204ENST00000360524 ELMSAN1Q6PJG2 1045 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 TRIM59Q8IWR1 403 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 MTRQ99707 1265 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 TRPV6Q9H1D0 765 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 RNF146Q9NTX7 359 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 LGALS16A8MUM7 142 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 ARHGEF9O43307 516 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 STAT3P40763 770 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 ZNF746Q6NUN9 644 aaPredicted RBP13□□□□□ -0.33
CCDC144A-204ENST00000360524 KLC3Q6P597 504 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 PROM2Q8N271 834 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 RNF25Q96BH1 459 aaPredicted RBP13□□□□□ -0.33
CCDC144A-204ENST00000360524 NUP85Q9BW27 656 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 TOPORSQ9NS56 1045 aaPredicted RBP13□□□□□ -0.33
CCDC144A-204ENST00000360524 LZTS1Q9Y250 596 aa13□□□□□ -0.33
CCDC144A-204ENST00000360524 CLTCL1P53675 1640 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 PP2D1A8MPX8 630 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 SFNP31947 248 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 PSMC1P62191 440 aaKnown RBP12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 COASYQ13057 564 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 ALX1Q15699 326 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 GTSE1Q9NYZ3 720 aa12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 WARS2Q9UGM6 360 aaKnown RBP12.99□□□□□ -0.33
CCDC144A-204ENST00000360524 FOXN1O15353 648 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms