RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 MBTD1Q05BQ5 628 aa18.88■□□□□ 0.61
FAM3D-201ENST00000358781 PTPAQ15257 358 aa18.88■□□□□ 0.61
FAM3D-201ENST00000358781 ZRSR1Q15695 479 aaKnown RBP18.88■□□□□ 0.61
FAM3D-201ENST00000358781 CCDC85BQ15834 202 aaPredicted RBP18.88■□□□□ 0.61
FAM3D-201ENST00000358781 MICALL1Q8N3F8 863 aa18.88■□□□□ 0.61
FAM3D-201ENST00000358781 KCTD17Q8N5Z5 321 aa18.88■□□□□ 0.61
FAM3D-201ENST00000358781 RNF169Q8NCN4 708 aa18.88■□□□□ 0.61
FAM3D-201ENST00000358781 PPM1EQ8WY54 764 aa18.88■□□□□ 0.61
FAM3D-201ENST00000358781 PNMA5Q96PV4 448 aa18.88■□□□□ 0.61
FAM3D-201ENST00000358781 TMEM117Q9H0C3 514 aa18.88■□□□□ 0.61
FAM3D-201ENST00000358781 NT5C3AQ9H0P0 336 aa18.88■□□□□ 0.61
FAM3D-201ENST00000358781 LRRIQ4A6NIV6 560 aa18.87■□□□□ 0.61
FAM3D-201ENST00000358781 SLC26A4O43511 780 aa18.87■□□□□ 0.61
FAM3D-201ENST00000358781 ERLIN2O94905 339 aa18.87■□□□□ 0.61
FAM3D-201ENST00000358781 SKIP12755 728 aa18.87■□□□□ 0.61
FAM3D-201ENST00000358781 LONP1P36776 959 aaKnown RBP18.87■□□□□ 0.61
FAM3D-201ENST00000358781 RAB27AP51159 221 aa18.87■□□□□ 0.61
FAM3D-201ENST00000358781 GPM6BQ13491 265 aa18.87■□□□□ 0.61
FAM3D-201ENST00000358781 CABP7Q86V35 215 aa18.87■□□□□ 0.61
FAM3D-201ENST00000358781 BSNDQ8WZ55 320 aa18.87■□□□□ 0.61
FAM3D-201ENST00000358781 C11orf84Q9BUA3 381 aaPredicted RBP18.87■□□□□ 0.61
FAM3D-201ENST00000358781 PLVAPQ9BX97 442 aa18.87■□□□□ 0.61
FAM3D-201ENST00000358781 FAM105AQ9NUU6 356 aa18.87■□□□□ 0.61
FAM3D-201ENST00000358781 TSPAN1O60635 241 aa18.86■□□□□ 0.61
FAM3D-201ENST00000358781 ZNF623O75123 536 aa18.86■□□□□ 0.61
FAM3D-201ENST00000358781 AXLP30530 894 aa18.86■□□□□ 0.61
FAM3D-201ENST00000358781 GRIN1Q05586 938 aa18.86■□□□□ 0.61
FAM3D-201ENST00000358781 AMHR2Q16671 573 aa18.86■□□□□ 0.61
FAM3D-201ENST00000358781 TMEM119Q4V9L6 283 aa18.86■□□□□ 0.61
FAM3D-201ENST00000358781 CLLU1OSQ5K130 101 aa18.86■□□□□ 0.61
FAM3D-201ENST00000358781 CDCA2Q69YH5 1023 aaPredicted RBP18.86■□□□□ 0.61
FAM3D-201ENST00000358781 KIFAP3Q92845 792 aa18.86■□□□□ 0.61
FAM3D-201ENST00000358781 CDK5RAP3Q96JB5 506 aa18.86■□□□□ 0.61
FAM3D-201ENST00000358781 CASD1Q96PB1 797 aa18.86■□□□□ 0.61
FAM3D-201ENST00000358781 MYO7AQ13402 2215 aa18.85■□□□□ 0.61
FAM3D-201ENST00000358781 MYH15Q9Y2K3 1946 aa18.85■□□□□ 0.61
FAM3D-201ENST00000358781 PDIA4P13667 645 aaKnown RBP18.85■□□□□ 0.61
FAM3D-201ENST00000358781 UBA7P41226 1012 aa18.85■□□□□ 0.61
FAM3D-201ENST00000358781 NAMPTP43490 491 aa18.85■□□□□ 0.61
FAM3D-201ENST00000358781 NCBP1Q09161 790 aaKnown RBP18.85■□□□□ 0.61
FAM3D-201ENST00000358781 UBXN11Q5T124 520 aa18.85■□□□□ 0.61
FAM3D-201ENST00000358781 ABI1Q8IZP0 508 aa18.85■□□□□ 0.61
FAM3D-201ENST00000358781 SLC17A8Q8NDX2 589 aa18.85■□□□□ 0.61
FAM3D-201ENST00000358781 MRPL38Q96DV4 380 aaKnown RBP18.85■□□□□ 0.61
FAM3D-201ENST00000358781 CCDC51Q96ER9 411 aa18.85■□□□□ 0.61
FAM3D-201ENST00000358781 PLIN2Q99541 437 aa18.85■□□□□ 0.61
FAM3D-201ENST00000358781 RUSC1Q9BVN2 902 aa18.85■□□□□ 0.61
FAM3D-201ENST00000358781 TYW1Q9NV66 732 aaKnown RBP18.85■□□□□ 0.61
FAM3D-201ENST00000358781 PCDHB2Q9Y5E7 798 aa18.85■□□□□ 0.61
FAM3D-201ENST00000358781 SPTBN5Q9NRC6 3674 aaKnown RBP18.85■□□□□ 0.61
FAM3D-201ENST00000358781 XIRP2A4UGR9 3374 aa18.85■□□□□ 0.61
FAM3D-201ENST00000358781 MARCKSP29966 332 aaPredicted RBP18.84■□□□□ 0.61
FAM3D-201ENST00000358781 CEBPZQ03701 1054 aaKnown RBP18.84■□□□□ 0.61
FAM3D-201ENST00000358781 PPP2R5AQ15172 486 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 PTPROQ16827 1216 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 NAALADL2Q58DX5 795 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 RINT1Q6NUQ1 792 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 NOTUMQ6P988 496 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 C1orf186Q6ZWK4 172 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 ZBTB8OSQ8IWT0 167 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 SPRYD3Q8NCJ5 442 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 HELQQ8TDG4 1101 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 P2RX5Q93086 422 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 CALML4Q96GE6 196 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 CPB2Q96IY4 423 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 IFT74Q96LB3 600 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 USP28Q96RU2 1077 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 C2orf40Q9H1Z8 148 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 CWH43Q9H720 699 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 POLD4Q9HCU8 107 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 HCSTQ9UBK5 93 aa18.84■□□□□ 0.61
FAM3D-201ENST00000358781 FBXO2Q9UK22 296 aaPredicted RBP18.84■□□□□ 0.61
FAM3D-201ENST00000358781 MORC2Q9Y6X9 1032 aaPredicted RBP18.84■□□□□ 0.61
FAM3D-201ENST00000358781 B4GALT5O43286 388 aa18.83■□□□□ 0.61
FAM3D-201ENST00000358781 ARF4P18085 180 aaPredicted RBP18.83■□□□□ 0.61
FAM3D-201ENST00000358781 SPOUT1Q5T280 376 aaKnown RBP18.83■□□□□ 0.61
FAM3D-201ENST00000358781 PPP4R3CPQ6ZMV5 832 aa18.83■□□□□ 0.61
FAM3D-201ENST00000358781 LRRC55Q6ZSA7 311 aa18.83■□□□□ 0.61
FAM3D-201ENST00000358781 MRPL10Q7Z7H8 261 aaKnown RBP18.83■□□□□ 0.61
FAM3D-201ENST00000358781 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.83■□□□□ 0.61
FAM3D-201ENST00000358781 LRRC43Q8N309 656 aa18.83■□□□□ 0.61
FAM3D-201ENST00000358781 SYT2Q8N9I0 419 aaPredicted RBP18.83■□□□□ 0.61
FAM3D-201ENST00000358781 DEPTORQ8TB45 409 aa18.83■□□□□ 0.61
FAM3D-201ENST00000358781 LPPQ93052 612 aa18.83■□□□□ 0.61
FAM3D-201ENST00000358781 PGBD4Q96DM1 585 aa18.83■□□□□ 0.61
FAM3D-201ENST00000358781 CSRNP2Q9H175 543 aa18.83■□□□□ 0.61
FAM3D-201ENST00000358781 AAASQ9NRG9 546 aa18.83■□□□□ 0.61
FAM3D-201ENST00000358781 SRPRBQ9Y5M8 271 aaKnown RBP18.83■□□□□ 0.61
FAM3D-201ENST00000358781 GRM6O15303 877 aa18.82■□□□□ 0.6
FAM3D-201ENST00000358781 HIP1RO75146 1068 aa18.82■□□□□ 0.6
FAM3D-201ENST00000358781 SSBP05455 408 aaKnown RBP eCLIP18.82■□□□□ 0.6
FAM3D-201ENST00000358781 PLA2G4BP0C869 781 aa18.82■□□□□ 0.6
FAM3D-201ENST00000358781 ZSCAN22P10073 491 aaPredicted RBP18.82■□□□□ 0.6
FAM3D-201ENST00000358781 GUCY2CP25092 1073 aa18.82■□□□□ 0.6
FAM3D-201ENST00000358781 SLC12A3P55017 1021 aa18.82■□□□□ 0.6
FAM3D-201ENST00000358781 SLC39A14Q15043 492 aa18.82■□□□□ 0.6
FAM3D-201ENST00000358781 FAM187BQ17R55 369 aa18.82■□□□□ 0.6
FAM3D-201ENST00000358781 LONRF3Q496Y0 759 aa18.82■□□□□ 0.6
FAM3D-201ENST00000358781 DAW1Q8N136 415 aa18.82■□□□□ 0.6
FAM3D-201ENST00000358781 KLHL23Q8NBE8 558 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms