RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 FBXO16Q8IX29 292 aaPredicted RBP13.81□□□□□ -0.2
RTFDC1-202ENST00000357348 IWS1Q96ST2 819 aa13.81□□□□□ -0.2
RTFDC1-202ENST00000357348 EIF2AK1Q9BQI3 630 aaKnown RBP13.81□□□□□ -0.2
RTFDC1-202ENST00000357348 ADGRA2Q96PE1 1338 aa13.81□□□□□ -0.2
RTFDC1-202ENST00000357348 ZBTB39O15060 712 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 USP8P40818 1118 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 PSMC6P62333 389 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 SLC7A5Q01650 507 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 TMEM63BQ5T3F8 832 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 C8orf74Q6P047 294 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 CNNM4Q6P4Q7 775 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 PLEKHH3Q7Z736 793 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 TPH2Q8IWU9 490 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 IFT20Q8IY31 132 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 KIAA0895Q8NCT3 520 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 BANK1Q8NDB2 785 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 PIK3R5Q8WYR1 880 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 DYDC2Q96IM9 177 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 NDST4Q9H3R1 872 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 RBM12Q9NTZ6 932 aaKnown RBP13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 SALL4Q9UJQ4 1053 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 MAGEA1P43355 309 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 ASIC1P78348 528 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 MAN2A1Q16706 1144 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 CCDC181Q5TID7 509 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 RUFY1Q96T51 708 aa13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 MYCBPQ99417 103 aaPredicted RBP13.8□□□□□ -0.2
RTFDC1-202ENST00000357348 HTTP42858 3142 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 GRID2IPA4D2P6 1211 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 ZNF233A6NK53 670 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 MEFVO15553 781 aaPredicted RBP13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 SPATA31C1P0DKV0 1188 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 AMPD3Q01432 767 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 PPP2R5CQ13362 524 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 PDCLQ13371 301 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 LY6KQ17RY6 165 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 GNPTABQ3T906 1256 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 PDXDC1Q6P996 788 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 CYFIP1Q7L576 1253 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 NIPA1Q7RTP0 329 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 MIER3Q7Z3K6 550 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 EIF1ADQ8N9N8 165 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 ERMNQ8TAM6 284 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 PIGOQ8TEQ8 1089 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 GPRASP2Q96D09 838 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 ARHGAP39Q9C0H5 1083 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 EPN3Q9H201 632 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 PDGFCQ9NRA1 345 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 BLOC1S4Q9NUP1 217 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 TCEAL9Q9UHQ7 104 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 PVALEFA0A1B0GWK0 134 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 LRRC53A6NM62 1247 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 NDUFAB1O14561 156 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 TRPA1O75762 1119 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 CCNE2O96020 404 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 KCNA2P16389 499 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 CTGFP29279 349 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 MAPK4P31152 587 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 VEGFBP49765 207 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 PAK2Q13177 524 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 CFAP221Q4G0U5 840 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 HGSNATQ68CP4 663 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 XRRA1Q6P2D8 792 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 ARMCX2Q7L311 632 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 NPLOC4Q8TAT6 608 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.79□□□□□ -0.22e-8■■■■■ 72.2
RTFDC1-202ENST00000357348 SYN2Q92777 582 aaPredicted RBP13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 EEF2KMTQ96G04 330 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 NOX5Q96PH1 765 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 RIT2Q99578 217 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 SH2D3AQ9BRG2 576 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 POLD4Q9HCU8 107 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 EHD2Q9NZN4 543 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 WRAP73Q9P2S5 460 aaPredicted RBP13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 LRRC37A2A6NM11 1700 aa13.79□□□□□ -0.2
RTFDC1-202ENST00000357348 CA12O43570 354 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 STRNO43815 780 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 AKR1B10O60218 316 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 SLITRK3O94933 977 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 GLI1P08151 1106 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 MYBP10242 640 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 CYP2B6P20813 491 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 EDNRBP24530 442 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 LSP1P33241 339 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 NAP1L1P55209 391 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 GRB14Q14449 540 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 ZNF792Q3KQV3 632 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 FBXW10Q5XX13 1052 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 DYMQ7RTS9 669 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 CCDC91Q7Z6B0 441 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 LARP4BQ92615 738 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 RNPC3Q96LT9 517 aaKnown RBP13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 HINFPQ9BQA5 517 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 TBC1D22BQ9NU19 505 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 WDR81Q562E7 1941 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 SPATA31C2B4DYI2 1134 aa13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 BHMG1C9JSJ3 638 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-202ENST00000357348 NCK2O43639 380 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms