RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 IGFBP6P24592 240 aaPredicted RBP4.45□□□□□ -1.7
LIG4-201ENST00000356922 WNT7BP56706 349 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 MBTD1Q05BQ5 628 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 MORC3Q14149 939 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 LPIN1Q14693 890 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 ZSCAN23Q3MJ62 389 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 ZBTB41Q5SVQ8 909 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 CNNM4Q6P4Q7 775 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 C11orf57Q6ZUT1 292 aaPredicted RBP4.45□□□□□ -1.7
LIG4-201ENST00000356922 EPM2AIP1Q7L775 607 aaPredicted RBP4.45□□□□□ -1.7
LIG4-201ENST00000356922 NELFCDQ8IXH7 590 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 TMEM192Q8IY95 271 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 CCDC113Q9H0I3 377 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 SEMA6BQ9H3T3 888 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 ARHGAP28Q9P2N2 729 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 ZMYM2Q9UBW7 1377 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 LRRIQ4A6NIV6 560 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 RHOBTB3O94955 611 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 MAPTP10636 758 aaKnown RBP4.45□□□□□ -1.7
LIG4-201ENST00000356922 CD52P31358 61 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 PTENP60484 403 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 PTK7Q13308 1070 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 CSPP1Q1MSJ5 1256 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 IER5Q5VY09 327 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 EEF1DP3Q658K8 133 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 UNC13DQ70J99 1090 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 HAUS6Q7Z4H7 955 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 FAM228AQ86W67 206 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 CEP120Q8N960 986 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 LINC01599Q8WXQ3 324 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 TOX2Q96NM4 488 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 CELF4Q9BZC1 486 aaKnown RBP4.45□□□□□ -1.7
LIG4-201ENST00000356922 NUP62CLQ9H1M0 184 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 RNF39Q9H2S5 420 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 PARVGQ9HBI0 331 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 PRDM5Q9NQX1 630 aaPredicted RBP4.45□□□□□ -1.7
LIG4-201ENST00000356922 HES2Q9Y543 173 aa4.45□□□□□ -1.7
LIG4-201ENST00000356922 COL1A2P08123 1366 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 DENND3A2RUS2 1198 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 ABLIM1O14639 778 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 MAGEB2O15479 319 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 KRT18P05783 430 aaKnown RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 EIF4BP23588 611 aaKnown RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 RFC5P40937 340 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 NCKAP1LP55160 1127 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 FBXO47Q5MNV8 452 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 DEFB128Q7Z7B8 93 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 C7orf61Q8IZ16 206 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 DBF4BQ8NFT6 615 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 NLRP7Q8WX94 980 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 PSPC1Q8WXF1 523 aaKnown RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 TARS2Q9BW92 718 aaKnown RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 HIPK3Q9H422 1215 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 FZD8Q9H461 694 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 CUEDC2Q9H467 287 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 MRPL44Q9H9J2 332 aaKnown RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 TMEM39AQ9NV64 488 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 PADI3Q9ULW8 664 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 CLTBP09497 229 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 DARSP14868 501 aaKnown RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 ARF4P18085 180 aaPredicted RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 STX17P56962 302 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 MRPS6P82932 125 aaKnown RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 GTF2BQ00403 316 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 NFX1Q12986 1120 aaKnown RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 HSP90AA4PQ58FG1 418 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 CDCA2Q69YH5 1023 aaPredicted RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 MCPH1Q8NEM0 835 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 BADQ92934 168 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 EIF2AQ9BY44 585 aaKnown RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 HSD3B7Q9H2F3 369 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 KCTD10Q9H3F6 313 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 CXXC1Q9P0U4 656 aaPredicted RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 ST3GAL5Q9UNP4 418 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 NOD1Q9Y239 953 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 USP34Q70CQ2 3546 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 PVALEFA0A1B0GWK0 134 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 INO80B-WBP1J3KQ70 363 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 CLIC2O15247 247 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 DKC1O60832 514 aaKnown RBP eCLIP4.44□□□□□ -1.7
LIG4-201ENST00000356922 FAM13AO94988 1023 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 ANKRD40Q6AI12 368 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 RPAINQ86UA6 219 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 FAM178BQ8IXR5 827 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 RETREG2Q8NC44 543 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 CBWD1Q9BRT8 395 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 INO80BQ9C086 356 aaPredicted RBP4.44□□□□□ -1.7
LIG4-201ENST00000356922 PTPRHQ9HD43 1115 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 KMT5AQ9NQR1 393 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 OLFML3Q9NRN5 406 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 ODF2LQ9ULJ1 636 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 TBX20Q9UMR3 447 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 STK24Q9Y6E0 443 aa4.44□□□□□ -1.7
LIG4-201ENST00000356922 DCDC2CA8MYV0 355 aa4.43□□□□□ -1.7
LIG4-201ENST00000356922 SLC26A4O43511 780 aa4.43□□□□□ -1.7
LIG4-201ENST00000356922 FAM189A1O60320 539 aa4.43□□□□□ -1.7
LIG4-201ENST00000356922 TSPAN1O60635 241 aa4.43□□□□□ -1.7
LIG4-201ENST00000356922 LRRN2O75325 713 aa4.43□□□□□ -1.7
LIG4-201ENST00000356922 GCNT3O95395 438 aa4.43□□□□□ -1.7
LIG4-201ENST00000356922 CASP4P49662 377 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms