RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SYCP3Q8IZU3 236 aa19.92■□□□□ 0.78
SMARCD3-202ENST00000356800 RETREG2Q8NC44 543 aa19.92■□□□□ 0.78
SMARCD3-202ENST00000356800 KLHDC9Q8NEP7 349 aa19.92■□□□□ 0.78
SMARCD3-202ENST00000356800 SPC25Q9HBM1 224 aa19.92■□□□□ 0.78
SMARCD3-202ENST00000356800 MAGEC2Q9UBF1 373 aaPredicted RBP19.92■□□□□ 0.78
SMARCD3-202ENST00000356800 DDX20Q9UHI6 824 aaKnown RBP19.92■□□□□ 0.78
SMARCD3-202ENST00000356800 KCNG1Q9UIX4 513 aa19.92■□□□□ 0.78
SMARCD3-202ENST00000356800 RRN3P2A6NIE6 340 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 KPNA6O60684 536 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 MXD4Q14582 209 aaPredicted RBP19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 HS2ST1Q7LGA3 356 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 FILIP1Q7Z7B0 1213 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 DEPTORQ8TB45 409 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 DMAC2Q9NW81 257 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 H0YCG3 227 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 CETN3O15182 167 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 TEX33O43247 280 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 DNM2P50570 870 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 ADAM17P78536 824 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 PTPN21Q16825 1174 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 FILIP1LQ4L180 1135 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 CDCA2Q69YH5 1023 aaPredicted RBP19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 CCSAPQ6IQ19 270 aaPredicted RBP19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 CXCL17Q6UXB2 119 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 RHPN2Q8IUC4 686 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 VSTM4Q8IW00 320 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 MTG1Q9BT17 334 aaPredicted RBP19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 KATNAL1Q9BW62 490 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 VPS16Q9H269 839 aa19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 RTN4Q9NQC3 1192 aaKnown RBP19.91■□□□□ 0.78
SMARCD3-202ENST00000356800 NRCAMQ92823 1304 aa19.9■□□□□ 0.78
SMARCD3-202ENST00000356800 MBLAC1A4D2B0 266 aaPredicted RBP19.9■□□□□ 0.78
SMARCD3-202ENST00000356800 ANKRD63C9JTQ0 380 aa19.9■□□□□ 0.78
SMARCD3-202ENST00000356800 SRGAP2CP0DJJ0 459 aa19.9■□□□□ 0.78
SMARCD3-202ENST00000356800 CST5P28325 142 aaPredicted RBP19.9■□□□□ 0.78
SMARCD3-202ENST00000356800 CASP4P49662 377 aa19.9■□□□□ 0.78
SMARCD3-202ENST00000356800 SLC39A4Q6P5W5 647 aa19.9■□□□□ 0.78
SMARCD3-202ENST00000356800 CCDC186Q7Z3E2 898 aa19.9■□□□□ 0.78
SMARCD3-202ENST00000356800 RNF149Q8NC42 400 aa19.9■□□□□ 0.78
SMARCD3-202ENST00000356800 GOLGA5Q8TBA6 731 aa19.9■□□□□ 0.78
SMARCD3-202ENST00000356800 TUBGCP2Q9BSJ2 902 aa19.9■□□□□ 0.78
SMARCD3-202ENST00000356800 AKAP3O75969 853 aa19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 EDN1P05305 212 aa19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 RPL13P26373 211 aaKnown RBP19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 HOXC8P31273 242 aa19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 MTIF2P46199 727 aaKnown RBP19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 MARSP56192 900 aaKnown RBP19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 MIIPQ5JXC2 388 aa19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 NFRKBQ6P4R8 1299 aa19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 SLC9A9Q8IVB4 645 aa19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 KIAA0319LQ8IZA0 1049 aa19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 SH3TC2Q8TF17 1288 aa19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 ZNF668Q96K58 619 aaPredicted RBP19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 CCDC113Q9H0I3 377 aa19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 HDAC6Q9UBN7 1215 aa19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 EXOC7Q9UPT5 735 aa19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 PTPN22Q9Y2R2 807 aa19.89■□□□□ 0.77
SMARCD3-202ENST00000356800 ASAP2O43150 1006 aa19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 SCP2P22307 547 aa19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 ADSSP30520 456 aa19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 GSDMDP57764 484 aa19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 KCNA10Q16322 511 aa19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 LHX8Q68G74 356 aa19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 C12orf56Q8IXR9 622 aa19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 TMEM174Q8WUU8 243 aa19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 CBWD1Q9BRT8 395 aa19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 TMEM134Q9H6X4 195 aa19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 HMX1Q9NP08 348 aaPredicted RBP19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 CGNQ9P2M7 1197 aaKnown RBP19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 USP20Q9Y2K6 914 aa19.88■□□□□ 0.77
SMARCD3-202ENST00000356800 K7ERI5 159 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 N4BP3O15049 544 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 ZEB2O60315 1214 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 GNA14O95837 355 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 VTNP04004 478 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 ASGR1P07306 291 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 TMOD1P28289 359 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 ABCD1P33897 745 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 CYP2J2P51589 502 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 SNRPFP62306 86 aaKnown RBP19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 ZNF200P98182 395 aaPredicted RBP19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 TMC6Q7Z403 805 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 NLRP4Q96MN2 994 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 PHLPP2Q6ZVD8 1323 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 LGALS16A8MUM7 142 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 MYCNP04198 464 aaPredicted RBP19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 PRKCSHP14314 528 aaPredicted RBP19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 PBX1P40424 430 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 TFDP1Q14186 410 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 MYBPC2Q14324 1141 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 CCDC40Q4G0X9 1142 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 CEP135Q66GS9 1140 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 SPECC1LQ69YQ0 1117 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 RUFY4Q6ZNE9 571 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 ZSCAN30Q86W11 494 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 TRIM59Q8IWR1 403 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 ZSWIM2Q8NEG5 633 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 BORCS6Q96GS4 357 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 PCIF1Q9H4Z3 704 aa19.87■□□□□ 0.77
SMARCD3-202ENST00000356800 IFT122Q9HBG6 1241 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms