RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 OTUB1Q96FW1 271 aaPredicted RBP15.81■□□□□ 0.12
LMX1B-201ENST00000355497 FAM167AQ96KS9 214 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 CYP4F11Q9HBI6 524 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 SEC31BQ9NQW1 1179 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 DDX28Q9NUL7 540 aaKnown RBP15.81■□□□□ 0.12
LMX1B-201ENST00000355497 M0QYV0 167 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 IL6STP40189 918 aaPredicted RBP15.81■□□□□ 0.12
LMX1B-201ENST00000355497 CDK8P49336 464 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 TTC23LQ6PF05 361 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 CATSPER1Q8NEC5 780 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 RAD54LQ92698 747 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 OSBP2Q969R2 916 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 TRAF3IP3Q9Y228 551 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 PIK3R2O00459 728 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 KDM1AO60341 852 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 ZBED8Q8IZ13 594 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 RNF25Q96BH1 459 aaPredicted RBP15.81■□□□□ 0.12
LMX1B-201ENST00000355497 TOPORSQ9NS56 1045 aaPredicted RBP15.81■□□□□ 0.12
LMX1B-201ENST00000355497 DAB1O75553 588 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 BBOX1O75936 387 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 SDC4P31431 198 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 AP1B1Q10567 949 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 KRT72Q14CN4 511 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 TTC30AQ86WT1 665 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 SFR1Q86XK3 245 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 PIGOQ8TEQ8 1089 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 ETNK1Q9HBU6 452 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.81■□□□□ 0.12
LMX1B-201ENST00000355497 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.81■□□□□ 0.12
LMX1B-201ENST00000355497 COPG1Q9Y678 874 aaKnown RBP15.81■□□□□ 0.12
LMX1B-201ENST00000355497 KRT14P02533 472 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 GPS1Q13098 491 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 XXYLT1Q8NBI6 393 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.81■□□□□ 0.12
LMX1B-201ENST00000355497 C11orf70Q9BRQ4 267 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 BRIP1Q9BX63 1249 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 ZNF229Q9UJW7 825 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 ANKRD65E5RJM6 399 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 F5H423 210 aaPredicted RBP15.8■□□□□ 0.12
LMX1B-201ENST00000355497 TBXAS1P24557 533 aaPredicted RBP15.8■□□□□ 0.12
LMX1B-201ENST00000355497 TRPC1P48995 793 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 CUL3Q13618 768 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 FASTKD5Q7L8L6 764 aaKnown RBP15.8■□□□□ 0.12
LMX1B-201ENST00000355497 RRM2BQ7LG56 351 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 OSBPL9Q96SU4 736 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 POLIQ9UNA4 740 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 NEMP1O14524 444 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 IREB2P48200 963 aaKnown RBP15.8■□□□□ 0.12
LMX1B-201ENST00000355497 PROSER3Q2NL68 480 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 KIAA2013Q8IYS2 634 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 GIMAP8Q8ND71 665 aaPredicted RBP15.8■□□□□ 0.12
LMX1B-201ENST00000355497 BEST2Q8NFU1 509 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 SP110Q9HB58 689 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 FAM187AA6NFU0 413 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 PLEKHA8P1O95397 391 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 PHKA2P46019 1235 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 GCLMP48507 274 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 VCPP55072 806 aaKnown RBP15.8■□□□□ 0.12
LMX1B-201ENST00000355497 ATP11CQ8NB49 1132 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 KDM4CQ9H3R0 1056 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 PCDHA6Q9UN73 950 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 PCDHA8Q9Y5H6 950 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 ZNF608Q9ULD9 1512 aaPredicted RBP15.8■□□□□ 0.12
LMX1B-201ENST00000355497 LARGE1O95461 756 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 KCNA2P16389 499 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 SKOR1P84550 965 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 SCN4BQ8IWT1 228 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 MCPH1Q8NEM0 835 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 SH3KBP1Q96B97 665 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 GRAMD1AQ96CP6 724 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 SLC13A1Q9BZW2 595 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 SLAIN2Q9P270 581 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 STAP1Q9ULZ2 295 aa15.8■□□□□ 0.12
LMX1B-201ENST00000355497 CYP2D7A0A087X1C5 515 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 TRIM49BA6NDI0 452 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 CD2BP2O95400 341 aaKnown RBP15.79■□□□□ 0.12
LMX1B-201ENST00000355497 KRT7P08729 469 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 DDX5P17844 614 aaKnown RBP15.79■□□□□ 0.12
LMX1B-201ENST00000355497 ACTN3Q08043 901 aaPredicted RBP15.79■□□□□ 0.12
LMX1B-201ENST00000355497 ATP6V1G3Q96LB4 118 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 GPBP1L1Q9HC44 474 aaPredicted RBP15.79■□□□□ 0.12
LMX1B-201ENST00000355497 PJA2O43164 708 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 PRPF4O43172 522 aaKnown RBP eCLIP15.79■□□□□ 0.12
LMX1B-201ENST00000355497 RANBP1P43487 201 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 WNT8AQ9H1J5 351 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 RUBCNLQ9H714 662 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 AFF4Q9UHB7 1163 aaKnown RBP15.79■□□□□ 0.12
LMX1B-201ENST00000355497 RPAP1Q9BWH6 1393 aaPredicted RBP15.79■□□□□ 0.12
LMX1B-201ENST00000355497 GNAT1P11488 350 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 MKRN3Q13064 507 aaKnown RBP15.79■□□□□ 0.12
LMX1B-201ENST00000355497 MTMR1Q13613 665 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 CEP55Q53EZ4 464 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 MIGA2Q7L4E1 593 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 TAS2R42Q7RTR8 314 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 B4GALNT2Q8NHY0 566 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 AIFM3Q96NN9 605 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 TRIM54Q9BYV2 358 aa15.79■□□□□ 0.12
LMX1B-201ENST00000355497 INTS2Q9H0H0 1204 aaKnown RBP15.79■□□□□ 0.12
LMX1B-201ENST00000355497 TAF1DQ9H5J8 278 aaPredicted RBP15.79■□□□□ 0.12
LMX1B-201ENST00000355497 CFAP69A5D8W1 941 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms