RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 USP17L18D6R9N7 530 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 USP17L22D6RA61 530 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 USP17L17D6RBQ6 530 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 USP17L19D6RCP7 530 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 USP17L20D6RJB6 530 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 MEIS2O14770 477 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 RASGRF2O14827 1237 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 BACH1O14867 736 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 RIPK2O43353 540 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 KCNQ2O43526 872 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 SNX3O60493 162 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 CYP3A4P08684 503 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 SREBF1P36956 1147 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 USP17L24Q0WX57 530 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 AUHQ13825 339 aaKnown RBP12.32□□□□□ -0.44
CAPN9-202ENST00000354537 PTPROQ16827 1216 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 ZNF568Q3ZCX4 644 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 USP17L6PQ6QN14 398 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 ALG3Q92685 438 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 GLG1Q92896 1179 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 SLCO2A1Q92959 643 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 LENG9Q96B70 501 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 ZSWIM1Q9BR11 485 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 INTS2Q9H0H0 1204 aaKnown RBP12.32□□□□□ -0.44
CAPN9-202ENST00000354537 TUFT1Q9NNX1 390 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 GGA1Q9UJY5 639 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 MTUS1Q9ULD2 1270 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 RABGAP1Q9Y3P9 1069 aa12.32□□□□□ -0.44
CAPN9-202ENST00000354537 STRCQ7RTU9 1775 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 IGSF9BQ9UPX0 1349 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 P4HA2O15460 535 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 SHMT1P34896 483 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 IFI35P80217 286 aaPredicted RBP12.31□□□□□ -0.44
CAPN9-202ENST00000354537 MKRN3Q13064 507 aaKnown RBP12.31□□□□□ -0.44
CAPN9-202ENST00000354537 RINT1Q6NUQ1 792 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 CERKQ8TCT0 537 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 ARHGEF26Q96DR7 871 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 SERPINB12Q96P63 405 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 PRMT1Q99873 361 aaKnown RBP12.31□□□□□ -0.44
CAPN9-202ENST00000354537 ELAC2Q9BQ52 826 aaKnown RBP12.31□□□□□ -0.44
CAPN9-202ENST00000354537 THAP2Q9H0W7 228 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 KCND2Q9NZV8 630 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 VAV3Q9UKW4 847 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.31□□□□□ -0.44
CAPN9-202ENST00000354537 RTCBQ9Y3I0 505 aaKnown RBP12.31□□□□□ -0.44
CAPN9-202ENST00000354537 USP15Q9Y4E8 981 aaPredicted RBP12.31□□□□□ -0.44
CAPN9-202ENST00000354537 ZMYM2Q9UBW7 1377 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 BCRP11274 1271 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 RPL21P46778 160 aaKnown RBP12.31□□□□□ -0.44
CAPN9-202ENST00000354537 PEX5P50542 639 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 GPC5P78333 572 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 CTTNQ14247 550 aaKnown RBP12.31□□□□□ -0.44
CAPN9-202ENST00000354537 PRR16Q569H4 304 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 SEL1L2Q5TEA6 688 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 ANKRD27Q96NW4 1050 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 SEMA4AQ9H3S1 761 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 COG5Q9UP83 839 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 FRMD4BQ9Y2L6 1034 aa12.31□□□□□ -0.44
CAPN9-202ENST00000354537 PASKQ96RG2 1323 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 TLDC2A0PJX2 215 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 CLIC2O15247 247 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 ATP2C2O75185 946 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 UFL1O94874 794 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 SUN1O94901 812 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 FAM13AO94988 1023 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 VIMP08670 466 aaKnown RBP12.3□□□□□ -0.44
CAPN9-202ENST00000354537 KRT13P13646 458 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 NQO1P15559 274 aaKnown RBP12.3□□□□□ -0.44
CAPN9-202ENST00000354537 SLC16A2P36021 539 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 HS2ST1Q7LGA3 356 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 IFT74Q96LB3 600 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 RUSC1Q9BVN2 902 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 BHMT2Q9H2M3 363 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 WHRNQ9P202 907 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 NYAP2Q9P242 653 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 BAIAP2L1Q9UHR4 511 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 USP20Q9Y2K6 914 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 MEIS1O00470 390 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 OPLAHO14841 1288 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 TCEA3O75764 348 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 GZMAP12544 262 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 ABCB4P21439 1286 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 CCND1P24385 295 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 GBP2P32456 591 aaPredicted RBP12.3□□□□□ -0.44
CAPN9-202ENST00000354537 COILP38432 576 aaPredicted RBP12.3□□□□□ -0.44
CAPN9-202ENST00000354537 SKIV2L2P42285 1042 aaKnown RBP12.3□□□□□ -0.44
CAPN9-202ENST00000354537 CLNS1AP54105 237 aaKnown RBP12.3□□□□□ -0.44
CAPN9-202ENST00000354537 EIF6P56537 245 aaKnown RBP12.3□□□□□ -0.44
CAPN9-202ENST00000354537 CCDC137Q6PK04 289 aaKnown RBP12.3□□□□□ -0.44
CAPN9-202ENST00000354537 SYDE1Q6ZW31 735 aaPredicted RBP12.3□□□□□ -0.44
CAPN9-202ENST00000354537 C1orf186Q6ZWK4 172 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 TBC1D16Q8TBP0 767 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 EIF2AK1Q9BQI3 630 aaKnown RBP12.3□□□□□ -0.44
CAPN9-202ENST00000354537 AMNQ9BXJ7 453 aa12.3□□□□□ -0.44
CAPN9-202ENST00000354537 RSPH10B2B2RC85 870 aa12.29□□□□□ -0.44
CAPN9-202ENST00000354537 RTN2O75298 545 aa12.29□□□□□ -0.44
CAPN9-202ENST00000354537 GJB6O95452 261 aa12.29□□□□□ -0.44
CAPN9-202ENST00000354537 HLA-DOAP06340 250 aa12.29□□□□□ -0.44
CAPN9-202ENST00000354537 RSPH10BP0C881 870 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms