RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 PLA2G4BP0C869 781 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 PEX5P50542 639 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 KPNB1Q14974 876 aaKnown RBP13.21□□□□□ -0.3
TRERF1-202ENST00000354325 PTPROQ16827 1216 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 ZNF365Q70YC5 407 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 HS2ST1Q7LGA3 356 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 MCUR1Q96AQ8 359 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 RPS6KC1Q96S38 1066 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 PPP1R12CQ9BZL4 782 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 PPCSQ9HAB8 311 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 UBN1Q9NPG3 1134 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 IRAK4Q9NWZ3 460 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 WHRNQ9P202 907 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 MAD2L2Q9UI95 211 aa13.21□□□□□ -0.3
TRERF1-202ENST00000354325 SPOPO43791 374 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 SHBGP04278 402 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 POLGP54098 1239 aaPredicted RBP13.2□□□□□ -0.3
TRERF1-202ENST00000354325 SPDYAQ5MJ70 313 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 PHLDB2Q86SQ0 1253 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 UHMK1Q8TAS1 419 aaKnown RBP13.2□□□□□ -0.3
TRERF1-202ENST00000354325 EPS8L3Q8TE67 593 aaKnown RBP13.2□□□□□ -0.3
TRERF1-202ENST00000354325 PNMA5Q96PV4 448 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 MMTAG2Q9BU76 263 aaKnown RBP13.2□□□□□ -0.3
TRERF1-202ENST00000354325 STK33Q9BYT3 514 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 TBC1D7Q9P0N9 293 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 MAGEA13PA6NCF6 341 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 PALM3A6NDB9 673 aaPredicted RBP13.2□□□□□ -0.3
TRERF1-202ENST00000354325 MAP3K7O43318 606 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 ABCB4P21439 1286 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 MARK3P27448 753 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 RAB27AP51159 221 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 MAP7Q14244 749 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 KNOP1Q1ED39 458 aaKnown RBP13.2□□□□□ -0.3
TRERF1-202ENST00000354325 C11orf63Q6NUN7 778 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 MIS12Q9H081 205 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 DDX25Q9UHL0 483 aaKnown RBP13.2□□□□□ -0.3
TRERF1-202ENST00000354325 TNS2Q63HR2 1409 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 AP1G2O75843 785 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 OAS1P00973 400 aaKnown RBP13.2□□□□□ -0.3
TRERF1-202ENST00000354325 POLE2P56282 527 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 THEMIS2Q5TEJ8 643 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 SLFN12Q8IYM2 578 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 PRCCQ92733 491 aaPredicted RBP13.2□□□□□ -0.3
TRERF1-202ENST00000354325 RNF25Q96BH1 459 aaPredicted RBP13.2□□□□□ -0.3
TRERF1-202ENST00000354325 DDX23Q9BUQ8 820 aaKnown RBP13.2□□□□□ -0.3
TRERF1-202ENST00000354325 SEMA4AQ9H3S1 761 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 VAT1LQ9HCJ6 419 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 ANGPTL2Q9UKU9 493 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 ATP2A1O14983 1001 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 PDHA1P08559 390 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 PON1P27169 355 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 RFC4P35249 363 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 PLS1Q14651 629 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 LRRC14Q15048 493 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 ARHGAP22Q7Z5H3 698 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 ATP8B4Q8TF62 1192 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 UBA5Q9GZZ9 404 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 DNM3Q9UQ16 869 aa13.2□□□□□ -0.3
TRERF1-202ENST00000354325 FGFR4P22455 802 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 HHATQ5VTY9 493 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 ADAT2Q7Z6V5 191 aaKnown RBP13.19□□□□□ -0.3
TRERF1-202ENST00000354325 ZNF34Q8IZ26 560 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 VPS52Q8N1B4 723 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 OLFM3Q96PB7 478 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 MTMR9Q96QG7 549 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 CENPKQ9BS16 269 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 DBR1Q9UK59 544 aaKnown RBP13.19□□□□□ -0.3
TRERF1-202ENST00000354325 SMG5Q9UPR3 1016 aaKnown RBP13.19□□□□□ -0.3
TRERF1-202ENST00000354325 FRMD4BQ9Y2L6 1034 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRERF1-202ENST00000354325 STARD13Q9Y3M8 1113 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.19□□□□□ -0.3
TRERF1-202ENST00000354325 ZNF804BA4D1E1 1349 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 GAP43P17677 238 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 PSMC2P35998 433 aaKnown RBP13.19□□□□□ -0.3
TRERF1-202ENST00000354325 CCDC62Q6P9F0 684 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 EPM2AIP1Q7L775 607 aaPredicted RBP13.19□□□□□ -0.3
TRERF1-202ENST00000354325 GDAP1Q8TB36 358 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 ATF2P15336 505 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 LONP2Q86WA8 852 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 GOLPH3Q9H4A6 298 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 KCNMB3Q9NPA1 279 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 SAR1AQ9NR31 198 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 TRAF3IP3Q9Y228 551 aa13.19□□□□□ -0.3
TRERF1-202ENST00000354325 MYH7BA7E2Y1 1941 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 SLC9A1P19634 815 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 GYG1P46976 350 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 POU5F1Q01860 360 aaKnown RBP13.18□□□□□ -0.3
TRERF1-202ENST00000354325 RASIP1Q5U651 963 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 MTHFD1LQ6UB35 978 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 ASRGL1Q7L266 308 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 EXOC3L1Q86VI1 746 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 SPICE1Q8N0Z3 855 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 GLG1Q92896 1179 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 ERP27Q96DN0 273 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 IL1RAPL1Q9NZN1 696 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 DLGAP2Q9P1A6 1054 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 FAM47DPA6NHR8 397 aa13.18□□□□□ -0.3
TRERF1-202ENST00000354325 CDR2Q01850 454 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms