RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PDE4CQ08493 712 aa19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 BFSP1Q12934 665 aa19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 PPP2R5CQ13362 524 aa19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 CEP55Q53EZ4 464 aa19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 MEX3CQ5U5Q3 659 aaKnown RBP19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 MMS22LQ6ZRQ5 1243 aa19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 CDAN1Q8IWY9 1227 aa19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 FMO2Q99518 471 aa19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 LXNQ9BS40 222 aa19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 TMX4Q9H1E5 349 aaPredicted RBP19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 EPB41L4BQ9H329 900 aa19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 FRMPD4Q14CM0 1322 aa19.58■□□□□ 0.73
PTP4A3-202ENST00000349124 SIPA1L1O43166 1804 aa19.58■□□□□ 0.72
PTP4A3-202ENST00000349124 POLR2MP0CAP2 368 aa19.58■□□□□ 0.72
PTP4A3-202ENST00000349124 ZNF131P52739 623 aa19.58■□□□□ 0.72
PTP4A3-202ENST00000349124 PTENP60484 403 aa19.58■□□□□ 0.72
PTP4A3-202ENST00000349124 PPP2R2AP63151 447 aa19.58■□□□□ 0.72
PTP4A3-202ENST00000349124 MAPK7Q13164 816 aa19.58■□□□□ 0.72
PTP4A3-202ENST00000349124 SF3B2Q13435 895 aaKnown RBP19.58■□□□□ 0.72
PTP4A3-202ENST00000349124 BTBD6Q96KE9 485 aa19.58■□□□□ 0.72
PTP4A3-202ENST00000349124 CBWD1Q9BRT8 395 aa19.58■□□□□ 0.72
PTP4A3-202ENST00000349124 NCANO14594 1321 aa19.58■□□□□ 0.72
PTP4A3-202ENST00000349124 EMSYQ7Z589 1322 aa19.58■□□□□ 0.72
PTP4A3-202ENST00000349124 TCRBV7S2A1N4TA0A589 114 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 TLDC2A0PJX2 215 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 CLRN2A0PK11 232 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 TRAPPC3O43617 180 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 GTF2A1P52655 376 aaPredicted RBP19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 IFFO1Q0D2I5 559 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 AOC3Q16853 763 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 DUPD1Q68J44 220 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 MCTP2Q6DN12 878 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 RUFY4Q6ZNE9 571 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 FBXO25Q8TCJ0 367 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 NACC1Q96RE7 527 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 AGPAT1Q99943 283 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 CTTNBP2NLQ9P2B4 639 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 PNMA2Q9UL42 364 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 ZBTB21Q9ULJ3 1066 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 UBR3Q6ZT12 1888 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 H0YHG0 523 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 KRT13P13646 458 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 PLEKHO2Q8TD55 490 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 ERP44Q9BS26 406 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 MKNK1Q9BUB5 465 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.57■□□□□ 0.721e-8■■■■□ 21.9
PTP4A3-202ENST00000349124 ZDHHC18Q9NUE0 388 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 DAAM1Q9Y4D1 1078 aa19.57■□□□□ 0.72
PTP4A3-202ENST00000349124 C6orf89Q6UWU4 347 aa19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 RNF25Q96BH1 459 aaPredicted RBP19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 PCDHB18PQ96TA0 734 aa19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 FAM114A2Q9NRY5 505 aa19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 TTC7AQ9ULT0 858 aaPredicted RBP19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 STK24Q9Y6E0 443 aa19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 ANKRD62A6NC57 917 aa19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 BIRC3Q13489 604 aa19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 MESDQ14696 234 aa19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 SLC27A3Q5K4L6 730 aa19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 RPUSD2Q8IZ73 545 aaKnown RBP19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 ARFGAP2Q8N6H7 521 aa19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 MASTLQ96GX5 879 aa19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 TXLNGYQ9BZA5 131 aa19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 GLIS2Q9BZE0 524 aaPredicted RBP19.56■□□□□ 0.72
PTP4A3-202ENST00000349124 AFF2P51816 1311 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 ARHGEF35A5YM69 484 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 GOLGA8IPA6NC78 632 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 GOLGA8JA6NMD2 632 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 K7ENM7 598 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 ATP2C2O75185 946 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 SGPL1O95470 568 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 VCAM1P19320 739 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 TTC27Q6P3X3 843 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 JAMLQ86YT9 394 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 CARD9Q9H257 536 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 THSD7AQ9UPZ6 1657 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 IPO5O00410 1097 aaKnown RBP19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 PPFIA2O75334 1257 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 ITGB5P18084 799 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 MTMR3Q13615 1198 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 ZDHHC24Q6UX98 284 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 PRELID2Q8N945 189 aa19.55■□□□□ 0.72
PTP4A3-202ENST00000349124 KIF22Q14807 665 aa19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 NFIL3Q16649 462 aa19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 C1orf220Q5T0J3 134 aa19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 PADI6Q6TGC4 694 aa19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 OSBPL7Q9BZF2 842 aa19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 UTRNP46939 3433 aa19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 KIAA0391O15091 583 aaKnown RBP19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 CALCAP01258 141 aa19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 KCNJ1P48048 391 aa19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 IFI35P80217 286 aaPredicted RBP19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 BYSLQ13895 437 aaKnown RBP19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 MIGA2Q7L4E1 593 aa19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 PRPF38AQ8NAV1 312 aaKnown RBP19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 MRIQ9BWK5 157 aa19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 STRA6Q9BX79 667 aa19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 SEMA4AQ9H3S1 761 aa19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 SCAF8Q9UPN6 1271 aaKnown RBP19.54■□□□□ 0.72
PTP4A3-202ENST00000349124 ONECUT3O60422 494 aaPredicted RBP19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 COMTP21964 271 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms