RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 NOTUMQ6P988 496 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 GLB1LQ6UWU2 654 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 LRRC43Q8N309 656 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 KIFAP3Q92845 792 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 CALML4Q96GE6 196 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 NFKBIZQ9BYH8 718 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 C2orf40Q9H1Z8 148 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 ZSCAN16Q9H4T2 348 aaPredicted RBP17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 FAM105AQ9NUU6 356 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 COG5Q9UP83 839 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 LAMA2P24043 3122 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 SLC26A4O43511 780 aa17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 LPXNO60711 386 aa17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 EYA4O95677 639 aa17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 UBA7P41226 1012 aa17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 CAPSQ13938 189 aa17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 IFNLR1Q8IU57 520 aaPredicted RBP17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 THNSL1Q8IYQ7 743 aa17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 DEPTORQ8TB45 409 aa17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 ATXN2LQ8WWM7 1075 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 CCDC51Q96ER9 411 aa17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 TRIM6Q9C030 488 aaPredicted RBP17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 KCNG1Q9UIX4 513 aa17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 ARID2Q68CP9 1835 aa17.47■□□□□ 0.39
TSPAN4-201ENST00000346501 RALGAPA2Q2PPJ7 1873 aa17.46■□□□□ 0.39
TSPAN4-201ENST00000346501 GLRA2P23416 452 aa17.46■□□□□ 0.39
TSPAN4-201ENST00000346501 PPM1AP35813 382 aa17.46■□□□□ 0.39
TSPAN4-201ENST00000346501 GATMP50440 423 aa17.46■□□□□ 0.39
TSPAN4-201ENST00000346501 URGCPQ8TCY9 931 aa17.46■□□□□ 0.39
TSPAN4-201ENST00000346501 ASAP3Q8TDY4 903 aa17.46■□□□□ 0.39
TSPAN4-201ENST00000346501 SYMPKQ92797 1274 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-201ENST00000346501 UBN1Q9NPG3 1134 aa17.46■□□□□ 0.39
TSPAN4-201ENST00000346501 TYW1Q9NV66 732 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-201ENST00000346501 PRMT7Q9NVM4 692 aaPredicted RBP17.46■□□□□ 0.39
TSPAN4-201ENST00000346501 DAXXQ9UER7 740 aaPredicted RBP17.46■□□□□ 0.39
TSPAN4-201ENST00000346501 PUF60Q9UHX1 559 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-201ENST00000346501 PRRC2BQ5JSZ5 2229 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 NCK2O43639 380 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 STX6O43752 255 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 ZNF623O75123 536 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 SSBP05455 408 aaKnown RBP eCLIP17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 LONP1P36776 959 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 NAMPTP43490 491 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 MRPS5P82675 430 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 KRT17Q04695 432 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 RNASELQ05823 741 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 BMS1Q14692 1282 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 SF3A1Q15459 793 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 HLA-CQ95604 372 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 PRIMPOLQ96LW4 560 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 DRC1Q96MC2 740 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 ZNF558Q96NG5 402 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 TIPINQ9BVW5 301 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 NSUN3Q9H649 340 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 MINDY3Q9H8M7 445 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 PCDHB2Q9Y5E7 798 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 PHLPP2Q6ZVD8 1323 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 CNTNAP2Q9UHC6 1331 aa17.45■□□□□ 0.38
TSPAN4-201ENST00000346501 NLRC5Q86WI3 1866 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 PP2D1A8MPX8 630 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 CDC25AP30304 524 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 TXLNAP40222 546 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 ALDH7A1P49419 539 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 EFNA5P52803 228 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 UBE3AQ05086 875 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 MAPK6Q16659 721 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 APBB1IPQ7Z5R6 666 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 ZNF598Q86UK7 904 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 CABP7Q86V35 215 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 KLHL23Q8NBE8 558 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 HELQQ8TDG4 1101 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 CASD1Q96PB1 797 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 GPRC5CQ9NQ84 441 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 KANSL3Q9P2N6 904 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 PLAGL2Q9UPG8 496 aa17.44■□□□□ 0.38
TSPAN4-201ENST00000346501 E9PMD0 336 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 TSPAN1O60635 241 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 ITGA4P13612 1032 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 MBTD1Q05BQ5 628 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 IL17AQ16552 155 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 ECM1Q16610 540 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 COLGALT1Q8NBJ5 622 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 MICAL1Q8TDZ2 1067 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 FAM193BQ96PV7 902 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 ADPGKQ9BRR6 497 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 CSRNP2Q9H175 543 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 C17orf75Q9HAS0 396 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 ALG13Q9NP73 1137 aaKnown RBP17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 KCND2Q9NZV8 630 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 INPP5FQ9Y2H2 1132 aa17.43■□□□□ 0.38
TSPAN4-201ENST00000346501 COL4A4P53420 1690 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 GRM6O15303 877 aa17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 LIG1P18858 919 aa17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 DMP1Q13316 513 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 NOMO2Q5JPE7 1267 aa17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 TJAP1Q5JTD0 557 aa17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 HYIQ5T013 277 aa17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 PDE12Q6L8Q7 609 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 SLC27A1Q6PCB7 646 aa17.42■□□□□ 0.38
TSPAN4-201ENST00000346501 KCNT2Q6UVM3 1135 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms