RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MYL1P05976 194 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 HOXC6P09630 235 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 MAN1A1P33908 653 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 ARHGAP25P42331 645 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 AFG1LQ8WV93 481 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 CHMP6Q96FZ7 201 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 PCDHB8Q9UN66 801 aa11.67□□□□□ -0.54
CLCN6-202ENST00000346436 SLCO1A2P46721 670 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 GRM4Q14833 912 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 RAB42Q8N4Z0 105 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 PIGOQ8TEQ8 1089 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 SH3TC2Q8TF17 1288 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 OSBPL9Q96SU4 736 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 SH3GLB2Q9NR46 395 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 DLG5Q8TDM6 1919 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 POTEB3A0JP26 581 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 POTECB2RU33 542 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 RPS6KA5O75582 802 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 SERPING1P05155 500 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 GARSP41250 739 aaKnown RBP11.66□□□□□ -0.54
CLCN6-202ENST00000346436 ERVK-24P63145 666 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 MTMR3Q13615 1198 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 CTTNQ14247 550 aaKnown RBP11.66□□□□□ -0.54
CLCN6-202ENST00000346436 E2F4Q16254 413 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 CHADLQ6NUI6 762 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 FAM117BQ6P1L5 589 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 POTEBQ6S5H4 581 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 BZW1Q7L1Q6 419 aaKnown RBP11.66□□□□□ -0.54
CLCN6-202ENST00000346436 LRRC1Q9BTT6 524 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 STARD7Q9NQZ5 370 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 IPPQ9Y573 584 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 SALL1Q9NSC2 1324 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 A0A0U1RQJ8 604 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 APOEP02649 317 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 PLTPP55058 493 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 NAA25Q14CX7 972 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 UNC13DQ70J99 1090 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 HEXIM2Q96MH2 286 aaKnown RBP11.66□□□□□ -0.54
CLCN6-202ENST00000346436 TBC1D8O95759 1140 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 COG7P83436 770 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 EIF2B5Q13144 721 aaKnown RBP11.66□□□□□ -0.54
CLCN6-202ENST00000346436 DGKDQ16760 1214 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 ADSSL1Q8N142 457 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 CDKL2Q92772 493 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 P3H4Q92791 437 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 RAB17Q9H0T7 212 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 FAM114A2Q9NRY5 505 aa11.66□□□□□ -0.54
CLCN6-202ENST00000346436 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLCN6-202ENST00000346436 IRX5P78411 483 aaPredicted RBP11.65□□□□□ -0.54
CLCN6-202ENST00000346436 HDLBPQ00341 1268 aaKnown RBP11.65□□□□□ -0.54
CLCN6-202ENST00000346436 CAPN11Q9UMQ6 739 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 STK38LQ9Y2H1 464 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 F5H6K3 240 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 H2AFXP16104 143 aaPredicted RBP11.65□□□□□ -0.54
CLCN6-202ENST00000346436 ATXN3P54252 364 aaPredicted RBP11.65□□□□□ -0.54
CLCN6-202ENST00000346436 KLRC3Q07444 240 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 RPS6KA2Q15349 733 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 RAB44Q7Z6P3 723 aaPredicted RBP11.65□□□□□ -0.54
CLCN6-202ENST00000346436 SCYL3Q8IZE3 742 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 SOCS4Q8WXH5 440 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 YME1L1Q96TA2 773 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 BHMT2Q9H2M3 363 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 SLC38A7Q9NVC3 462 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 CNTNAP5Q8WYK1 1306 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 MSCO60682 206 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 LRG1P02750 347 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 DHX9Q08211 1270 aaKnown RBP11.65□□□□□ -0.54
CLCN6-202ENST00000346436 COASYQ13057 564 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.54
CLCN6-202ENST00000346436 PPP2R5EQ16537 467 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 FAM186BQ8IYM0 893 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 EVA1BQ9NVM1 165 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 FKTNO75072 461 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 PLEKP08567 350 aaPredicted RBP11.65□□□□□ -0.54
CLCN6-202ENST00000346436 PRELPP51888 382 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 RCAN1P53805 252 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 SNX1Q13596 522 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 CCDC6Q16204 474 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 KIAA1755Q5JYT7 1200 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 OR6B2Q6IFH4 312 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 CACNA2D3Q8IZS8 1091 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 STKLD1Q8NE28 680 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 RAD54LQ92698 747 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 HMX1Q9NP08 348 aaPredicted RBP11.65□□□□□ -0.54
CLCN6-202ENST00000346436 DUSP10Q9Y6W6 482 aa11.65□□□□□ -0.54
CLCN6-202ENST00000346436 UCMAQ8WVF2 138 aa11.65□□□□□ -0.55
CLCN6-202ENST00000346436 TRIM9Q9C026 710 aa11.65□□□□□ -0.55
CLCN6-202ENST00000346436 NOVA2Q9UNW9 492 aaKnown RBP11.65□□□□□ -0.55
CLCN6-202ENST00000346436 DCCP43146 1447 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 POTEFA5A3E0 1075 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 WTIPA6NIX2 430 aaPredicted RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 SART1O43290 800 aaKnown RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 PHBP35232 272 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 ALDH7A1P49419 539 aaKnown RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 EFNA5P52803 228 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 LRRC63Q05C16 580 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 POTEGQ6S5H5 508 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 POTEEQ6S8J3 1075 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 RHPN2Q8IUC4 686 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms