RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 LIG1P18858 919 aa22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 NCBP1Q09161 790 aaKnown RBP22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 MAPK7Q13164 816 aa22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 RTN4RL1Q86UN2 441 aaPredicted RBP22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 TSPYL2Q9H2G4 693 aaPredicted RBP22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 CUEDC2Q9H467 287 aa22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 C17orf75Q9HAS0 396 aa22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 MYH11P35749 1972 aa22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 MGEA5O60502 916 aa22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 TBCAO75347 108 aaKnown RBP22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 PFKFB1P16118 471 aa22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 CSPP1Q1MSJ5 1256 aa22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 FAM43BQ6ZT52 329 aaPredicted RBP22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 IFNLR1Q8IU57 520 aaPredicted RBP22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 LINC01599Q8WXQ3 324 aa22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 STAMQ92783 540 aa22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 KIFC3Q9BVG8 833 aa22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 KMT5AQ9NQR1 393 aa22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 LARSQ9P2J5 1176 aaKnown RBP22.99■■□□□ 1.27
SMARCB1-202ENST00000344921 NPTX2P47972 431 aa22.98■■□□□ 1.27
SMARCB1-202ENST00000344921 MBTD1Q05BQ5 628 aa22.98■■□□□ 1.27
SMARCB1-202ENST00000344921 GIT2Q14161 759 aa22.98■■□□□ 1.27
SMARCB1-202ENST00000344921 E2F4Q16254 413 aa22.98■■□□□ 1.27
SMARCB1-202ENST00000344921 HERC6Q8IVU3 1022 aa22.98■■□□□ 1.27
SMARCB1-202ENST00000344921 FSIP1Q8NA03 581 aa22.98■■□□□ 1.27
SMARCB1-202ENST00000344921 DDX12PQ92771 950 aa22.98■■□□□ 1.27
SMARCB1-202ENST00000344921 RGS18Q9NS28 235 aa22.98■■□□□ 1.27
SMARCB1-202ENST00000344921 KCNG1Q9UIX4 513 aa22.98■■□□□ 1.27
SMARCB1-202ENST00000344921 A0A1W2PQ27 194 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 A0A1W2PQ64 194 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 A0A1W2PQD8 194 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 PLS3P13797 630 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 RABGGTBP53611 331 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 SMTNP53814 917 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 AMPD3Q01432 767 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 PCBP1Q15365 356 aaKnown RBP eCLIP22.97■■□□□ 1.273e-10■■■□□ 18.2
SMARCB1-202ENST00000344921 CDCA2Q69YH5 1023 aaPredicted RBP22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 TWF2Q6IBS0 349 aaKnown RBP22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 CEP57L1Q8IYX8 460 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 MYCT1Q8N699 235 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 MRPS27Q92552 414 aaKnown RBP22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 LRRC27Q9C0I9 530 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 CHST12Q9NRB3 414 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 C1orf112Q9NSG2 853 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 DACT1Q9NYF0 836 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 LRFN2Q9ULH4 789 aa22.97■■□□□ 1.27
SMARCB1-202ENST00000344921 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 MYMKA6NI61 221 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 SMAD3P84022 425 aaKnown RBP22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 MAPK6Q16659 721 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 TMEM132AQ24JP5 1023 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 SLC24A5Q71RS6 500 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 TOP1MTQ969P6 601 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 TNMDQ9H2S6 317 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 PARVGQ9HBI0 331 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 AGPAT5Q9NUQ2 364 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 TLL1O43897 1013 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 SYKP43405 635 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 EFNA5P52803 228 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 DSC3Q14574 896 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 PRMT7Q9NVM4 692 aaPredicted RBP22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 MSRAQ9UJ68 235 aa22.96■■□□□ 1.27
SMARCB1-202ENST00000344921 ADGRA3Q8IWK6 1321 aa22.95■■□□□ 1.26
SMARCB1-202ENST00000344921 K7ERI5 159 aa22.95■■□□□ 1.26
SMARCB1-202ENST00000344921 SLC16A4O15374 487 aa22.95■■□□□ 1.26
SMARCB1-202ENST00000344921 GJB5O95377 273 aa22.95■■□□□ 1.26
SMARCB1-202ENST00000344921 IDEP14735 1019 aa22.95■■□□□ 1.26
SMARCB1-202ENST00000344921 NDUFA8P51970 172 aa22.95■■□□□ 1.26
SMARCB1-202ENST00000344921 CPB2Q96IY4 423 aa22.95■■□□□ 1.26
SMARCB1-202ENST00000344921 PBX4Q9BYU1 374 aa22.95■■□□□ 1.26
SMARCB1-202ENST00000344921 MAGEF1Q9HAY2 307 aa22.95■■□□□ 1.26
SMARCB1-202ENST00000344921 SERTAD1Q9UHV2 236 aa22.95■■□□□ 1.26
SMARCB1-202ENST00000344921 PCDHB7Q9Y5E2 793 aa22.95■■□□□ 1.26
SMARCB1-202ENST00000344921 PTPRSQ13332 1948 aa22.95■■□□□ 1.26
SMARCB1-202ENST00000344921 SOX1O00570 391 aaPredicted RBP22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 TSPAN1O60635 241 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 PRKCBP05771 671 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 STAG3L1P0CL83 205 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 PBX2P40425 430 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 SARSP49591 514 aaKnown RBP22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 LRCH3Q96II8 777 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 KBTBD4Q9NVX7 518 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 RNF216Q9NWF9 866 aaPredicted RBP22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 HPSEQ9Y251 543 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 C9IYK1 514 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 AXLP30530 894 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 AFMP43652 599 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 RAB30Q15771 203 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 NOTUMQ6P988 496 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 RNF169Q8NCN4 708 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 SPIRE2Q8WWL2 714 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 PRIMPOLQ96LW4 560 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 NTPCRQ9BSD7 190 aaKnown RBP22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 FZD8Q9H461 694 aa22.94■■□□□ 1.26
SMARCB1-202ENST00000344921 B4GALT5O43286 388 aa22.93■■□□□ 1.26
SMARCB1-202ENST00000344921 TRAK2O60296 914 aa22.93■■□□□ 1.26
SMARCB1-202ENST00000344921 HOXA11P31270 313 aaPredicted RBP22.93■■□□□ 1.26
SMARCB1-202ENST00000344921 ZNF131P52739 623 aa22.93■■□□□ 1.26
SMARCB1-202ENST00000344921 PRPF4BQ13523 1007 aaKnown RBP22.93■■□□□ 1.26
SMARCB1-202ENST00000344921 NPAS4Q8IUM7 802 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms